Pairwise Alignments

Query, 312 a.a., tRNA pseudouridine(55) synthase TruB from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., tRNA pseudouridine(55) synthase TruB from Magnetospirillum magneticum AMB-1

 Score =  190 bits (483), Expect = 3e-53
 Identities = 104/275 (37%), Positives = 156/275 (56%), Gaps = 14/275 (5%)

Query: 1   MARRRKGRVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGE 60
           MAR+RKG  ++G + +DKP GI S   + KVKRL  A K GH G LDPLA+G+LPI LGE
Sbjct: 1   MARKRKGDPVNGWLAIDKPLGIGSTQVVAKVKRLLNAAKVGHGGTLDPLASGILPIALGE 60

Query: 61  ATKFSQFLLDSDKRYRVIAKLGERTDTSDSDGQVVQTRPVHVDYDTLLACIAKFRGETDQ 120
           ATK  Q+++D  K YR   + GE T + D + +V++T P     + + A +  F GE DQ
Sbjct: 61  ATKTVQYVMDGSKTYRFQVRWGEATASCDRESEVIETSPHRPTAEAIAAALPAFLGEIDQ 120

Query: 121 VPSMFSALKYQGRPLYEYARQGIEVPREARKITVYEIE-LHRFEGDEVEMEVHCSKGTYI 179
           +P  +SA+K  G+  Y+ AR G EV  + R++ +     L + + D  + EVHC KGTY+
Sbjct: 121 IPPAYSAIKIDGQRAYDLARAGEEVEIKPRRVAIKSFTLLGQPDADHADFEVHCGKGTYV 180

Query: 180 RTIVDDLGEMLGCGAHVTMLRRVGVANYPYERMVTLEQLNALVEQAHRDEKAVADVLDP- 238
           R++  DL   LG   HV++LRR+    +  +  ++LE L  L           + V  P 
Sbjct: 181 RSLARDLSLALGTVGHVSVLRRIACGPFNEQNAISLESLEDL-----------SQVPAPW 229

Query: 239 -LLLPMDTAVEALPEVNVIPELMTLIQHGQAVQVS 272
             LLP++TA++ +P + +       +Q G  V +S
Sbjct: 230 TFLLPIETALDDIPALALTESEARRLQSGNPVSIS 264