Pairwise Alignments

Query, 312 a.a., tRNA pseudouridine(55) synthase TruB from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., tRNA pseudouridine(55) synthase TruB from Serratia liquefaciens MT49

 Score =  447 bits (1149), Expect = e-130
 Identities = 219/306 (71%), Positives = 260/306 (84%)

Query: 4   RRKGRVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGEATK 63
           RR+GR IHGV+LLDKP G+SSNDALQKVKRLY A +AGHTGALDPLATGMLPICLGEATK
Sbjct: 5   RRRGRDIHGVLLLDKPQGLSSNDALQKVKRLYNANRAGHTGALDPLATGMLPICLGEATK 64

Query: 64  FSQFLLDSDKRYRVIAKLGERTDTSDSDGQVVQTRPVHVDYDTLLACIAKFRGETDQVPS 123
           FSQFLLDSDKRYRVIA+LG+RTDTSD+DGQ+VQ RPV+     L A +  FRG+  QVPS
Sbjct: 65  FSQFLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVNFTQAQLDAALDSFRGDIKQVPS 124

Query: 124 MFSALKYQGRPLYEYARQGIEVPREARKITVYEIELHRFEGDEVEMEVHCSKGTYIRTIV 183
           M+SALKYQG+ LYEYARQGIEVPREAR ITVY+++  R+EGDE+E+E+HCSKGTYIRTI 
Sbjct: 125 MYSALKYQGKKLYEYARQGIEVPREARSITVYDLQFIRWEGDELELEIHCSKGTYIRTIT 184

Query: 184 DDLGEMLGCGAHVTMLRRVGVANYPYERMVTLEQLNALVEQAHRDEKAVADVLDPLLLPM 243
           DDLGE+LGCGAHV  LRR+ VA YP ERMVTLEQLN L+EQA   E A  ++LDPLL+PM
Sbjct: 185 DDLGELLGCGAHVIYLRRLQVATYPIERMVTLEQLNELLEQAQAQEVAPGELLDPLLMPM 244

Query: 244 DTAVEALPEVNVIPELMTLIQHGQAVQVSGAPSDGMVRITGGEQKLFLGVGEIDDNGKVA 303
           D+ VE  PEVN++P +   ++ GQ VQV+GAP+ GMVRIT GE++ F+GVG+I D+G+VA
Sbjct: 245 DSPVENYPEVNLLPVVAGYVKQGQPVQVAGAPASGMVRITEGEERKFIGVGDIADDGRVA 304

Query: 304 PKRLVV 309
           P+RLVV
Sbjct: 305 PRRLVV 310