Pairwise Alignments

Query, 312 a.a., tRNA pseudouridine(55) synthase TruB from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., tRNA pseudouridine 55 synthase from Kangiella aquimarina DSM 16071

 Score =  315 bits (806), Expect = 1e-90
 Identities = 160/306 (52%), Positives = 221/306 (72%), Gaps = 8/306 (2%)

Query: 3   RRRKGRVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGEAT 62
           RR++GR I G++LLDKPT I+SN ALQ+ K LY A KAGHTGALDP+ATG+LPIC GEAT
Sbjct: 4   RRKRGRDITGILLLDKPTDITSNKALQQAKFLYFAAKAGHTGALDPIATGVLPICFGEAT 63

Query: 63  KFSQFLLDSDKRYRVIAKLGERTDTSDSDGQVVQTRPVHVDYDTLLACIAKFRGETDQVP 122
           KFSQ+LL++DK+YRV AKLGE+T T+D +G+V++++PV V  + L+  + +F+G   QVP
Sbjct: 64  KFSQYLLNADKKYRVTAKLGEKTTTADREGEVIESKPVDVTEEQLVKVLQQFKGTISQVP 123

Query: 123 SMFSALKYQGRPLYEYARQGIEVPREARKITVYEIELHRFEGDEVEMEVHCSKGTYIRTI 182
           SM+SALK  G PLY+ AR+GIEV R+AR++ +Y +EL  F  DE  ++VHCSKGTY+R +
Sbjct: 124 SMYSALKKDGVPLYKLARKGIEVERDAREVDIYSLELVTFSDDEFVLDVHCSKGTYVRNL 183

Query: 183 VDDLGEMLGCGAHVTMLRRVGVANYPYERMVTLEQLNALVEQAHRDEKAVADVLDPLLLP 242
           V+D+G+ LGCGAHV  LRR  V ++   + VTL  L  L +   + E      +D LLLP
Sbjct: 184 VEDIGDELGCGAHVLELRRTAVGDFNLGQTVTLAHLEELKQVDAKLE------MDELLLP 237

Query: 243 MDTAVEALPEVNVIPELMTLIQHGQAVQVSGAPSDGMVRITGGEQKLFLGVGEIDDNGKV 302
           ++ A+  +P V +  +    I+ GQAVQ++G P DG V +   +Q  F+GVG I+D+GKV
Sbjct: 238 VEQALSHMPLVQLTDDEAYYIRLGQAVQIAGVPIDGSVGLLHDDQ--FIGVGVINDDGKV 295

Query: 303 APKRLV 308
           AP RL+
Sbjct: 296 APSRLI 301