Pairwise Alignments

Query, 312 a.a., tRNA pseudouridine(55) synthase TruB from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., tRNA pseudouridine(55) synthase TruB from Erwinia tracheiphila SCR3

 Score =  405 bits (1041), Expect = e-118
 Identities = 197/306 (64%), Positives = 246/306 (80%)

Query: 4   RRKGRVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGEATK 63
           RR+GR +HGV+LLDKP G+SSNDALQKVKRL+ A +AGHTGALDPLATGMLPICLGEATK
Sbjct: 5   RRRGRDVHGVLLLDKPQGLSSNDALQKVKRLFAANRAGHTGALDPLATGMLPICLGEATK 64

Query: 64  FSQFLLDSDKRYRVIAKLGERTDTSDSDGQVVQTRPVHVDYDTLLACIAKFRGETDQVPS 123
           FS++LLDSDKRYRVIA+LG+RTDTSDSDG+++   P++     L   I +FRGET QVPS
Sbjct: 65  FSRYLLDSDKRYRVIARLGQRTDTSDSDGKIICECPLNFTQQQLDEAIDRFRGETQQVPS 124

Query: 124 MFSALKYQGRPLYEYARQGIEVPREARKITVYEIELHRFEGDEVEMEVHCSKGTYIRTIV 183
           M+SALKYQGR LYEYAR+GI VPRE+R I VYE+   R EGDE+E+E+HCSKGTYIRTI+
Sbjct: 125 MYSALKYQGRKLYEYAREGIAVPRESRSIVVYELAFIRCEGDELELEIHCSKGTYIRTII 184

Query: 184 DDLGEMLGCGAHVTMLRRVGVANYPYERMVTLEQLNALVEQAHRDEKAVADVLDPLLLPM 243
           DDLG+MLGCGAHV  LRR+ VA YP   MVTLEQL AL E+AHR + + A +LDPLL+PM
Sbjct: 185 DDLGDMLGCGAHVIYLRRLQVATYPVASMVTLEQLTALSEEAHRCQHSPAALLDPLLMPM 244

Query: 244 DTAVEALPEVNVIPELMTLIQHGQAVQVSGAPSDGMVRITGGEQKLFLGVGEIDDNGKVA 303
           D+   A PEVN++  +    + GQ VQ +  P+   VR+T GE++ F+G+ E+ ++G++A
Sbjct: 245 DSPAAAYPEVNLLSVVAAYFKLGQPVQAARTPAKSWVRVTEGEERKFIGMAEVIEDGRIA 304

Query: 304 PKRLVV 309
           P+RLVV
Sbjct: 305 PRRLVV 310