Pairwise Alignments

Query, 312 a.a., tRNA pseudouridine(55) synthase TruB from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., tRNA pseudouridine(55) synthase TruB from Dickeya dianthicola ME23

 Score =  429 bits (1102), Expect = e-125
 Identities = 211/306 (68%), Positives = 253/306 (82%)

Query: 4   RRKGRVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGEATK 63
           RR+GR IHGV+LLDKP G SSND LQKVKRL+ A KAGHTGALDPLATGMLP+CLGEATK
Sbjct: 5   RRRGRDIHGVLLLDKPQGASSNDVLQKVKRLFNANKAGHTGALDPLATGMLPVCLGEATK 64

Query: 64  FSQFLLDSDKRYRVIAKLGERTDTSDSDGQVVQTRPVHVDYDTLLACIAKFRGETDQVPS 123
           FSQ+LLD+DKRYRVIA+LG RTDTSD+DG V+Q R +    D L+  +  FRG+T QVPS
Sbjct: 65  FSQYLLDADKRYRVIARLGLRTDTSDADGNVIQERLITFTRDLLMQALDGFRGDTKQVPS 124

Query: 124 MFSALKYQGRPLYEYARQGIEVPREARKITVYEIELHRFEGDEVEMEVHCSKGTYIRTIV 183
           M+SALKYQGRPLYEYARQG+ VPREAR ITVYE++  R+EGDE+E+E+HCSKGTYIRTI+
Sbjct: 125 MYSALKYQGRPLYEYARQGLVVPREARDITVYELQFIRWEGDELELEIHCSKGTYIRTII 184

Query: 184 DDLGEMLGCGAHVTMLRRVGVANYPYERMVTLEQLNALVEQAHRDEKAVADVLDPLLLPM 243
           DDLGE LGCGAHV  LRR+ VA YP ERMVTLEQL AL EQA   E+ + ++LD LLLPM
Sbjct: 185 DDLGEKLGCGAHVIYLRRLQVATYPTERMVTLEQLQALREQAEAQEQPIGELLDVLLLPM 244

Query: 244 DTAVEALPEVNVIPELMTLIQHGQAVQVSGAPSDGMVRITGGEQKLFLGVGEIDDNGKVA 303
           DTAV+A  EVN+ P +   ++ GQAV+ +   +DGMVRIT G+++ F+G+GEIDD G+VA
Sbjct: 245 DTAVQAFAEVNLSPVVAGYLKLGQAVRAAATSADGMVRITEGDERRFIGMGEIDDEGRVA 304

Query: 304 PKRLVV 309
           P+RLVV
Sbjct: 305 PRRLVV 310