Pairwise Alignments

Query, 312 a.a., tRNA pseudouridine(55) synthase TruB from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., tRNA pseudouridine synthase B from Acinetobacter radioresistens SK82

 Score =  238 bits (607), Expect = 1e-67
 Identities = 131/302 (43%), Positives = 186/302 (61%), Gaps = 14/302 (4%)

Query: 8   RVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGEATKFSQF 67
           R ++GV LL+KP GISSN ALQKV+ LY AEKAGHTGALDPLA+G+LPICLGEATKFS +
Sbjct: 11  RPVNGVFLLNKPLGISSNAALQKVRWLYRAEKAGHTGALDPLASGLLPICLGEATKFSHY 70

Query: 68  LLDSDKRYRVIAKLGERTDTSDSDGQV-VQTRPVHVDYDTLLACIAKFRGETDQVPSMFS 126
           LLDS KRY+   +LG  T T D +G++ +Q     +D + +   +A+F+G  +QVP M+S
Sbjct: 71  LLDSTKRYQATIQLGHSTTTGDVEGEILLQAEIPELDEERIRQVLAQFKGNIEQVPPMYS 130

Query: 127 ALKYQGRPLYEYARQGIEVPREARKITVYEIELHRFEGDEVEMEVHCSKGTYIRTIVDDL 186
           ALK +GRPLYE AR+GIE+ REAR +++Y IEL  F    + +++ CSKGTYIR + +D+
Sbjct: 131 ALKKEGRPLYELARKGIEIEREARPVSIYAIELLSFTAQSITLDITCSKGTYIRVLGEDV 190

Query: 187 GEMLGCGAHVTMLRRVGVANYPYERMVTLEQLNALVEQAHRDEKAVADVLDPLLLPMDTA 246
            + LG   H+T L R+    +      T+E L +L E             + LLLP+   
Sbjct: 191 AQALGSYGHLTYLHRIKTGPFDLIPSYTIEYLESLNEAER----------EALLLPVYAP 240

Query: 247 VEALPEVNVIPELMTLIQHGQAVQVSGAPSDGMVRITGGEQKLFLGVGEIDDNGKVAPKR 306
           V+  P++ V          G    +    ++  V +  GE+   LG+ EI D  ++ PKR
Sbjct: 241 VDHFPKIQVPEGRSEYFSRGMESNIEHI-AETQVLVFDGEK--CLGLAEITDKKRLVPKR 297

Query: 307 LV 308
           ++
Sbjct: 298 VL 299