Pairwise Alignments

Query, 312 a.a., tRNA pseudouridine(55) synthase TruB from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., tRNA pseudouridine(55) synthase TruB from Acinetobacter baumannii LAC-4

 Score =  253 bits (646), Expect = 4e-72
 Identities = 136/302 (45%), Positives = 193/302 (63%), Gaps = 14/302 (4%)

Query: 8   RVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGEATKFSQF 67
           R I GV LL+KP G+SSN ALQKV+ LY A+KAGHTGALDPLATG+LPICLGEATKFS +
Sbjct: 11  RHISGVFLLNKPLGLSSNAALQKVRWLYRAQKAGHTGALDPLATGLLPICLGEATKFSHY 70

Query: 68  LLDSDKRYRVIAKLGERTDTSDSDGQVVQTRPVHV-DYDTLLACIAKFRGETDQVPSMFS 126
           LLDS KRY+   +LG+ T T D +G ++Q RP+ V   + +   + KFRG+  QVP M+S
Sbjct: 71  LLDSTKRYQTTVRLGQTTTTGDVEGDILQERPIPVLSKELIEQTLEKFRGDIQQVPPMYS 130

Query: 127 ALKYQGRPLYEYARQGIEVPREARKITVYEIELHRFEGDEVEMEVHCSKGTYIRTIVDDL 186
           ALK +G+PLYE AR+GIE+ REAR +T+Y +EL  F  + + ++V CSKGTYIR + +D+
Sbjct: 131 ALKKEGKPLYELARKGIEIEREARPVTIYALELIEFTENSITLDVTCSKGTYIRVLGEDI 190

Query: 187 GEMLGCGAHVTMLRRVGVANYPYERMVTLEQLNALVEQAHRDEKAVADVLDPLLLPMDTA 246
           GE LGCG H+TML R+   ++      T+E L +L E+            + LLLP+   
Sbjct: 191 GEALGCGGHLTMLHRIQTGHFELIPSYTIEYLESLTEEQR----------EALLLPVYAP 240

Query: 247 VEALPEVNVIPELMTLIQHGQAVQVSGAPSDGMVRITGGEQKLFLGVGEIDDNGKVAPKR 306
           ++   ++ V         +G    +  + ++  V +   E+   LG+ EI D  ++ PKR
Sbjct: 241 IDHFLKIQVPEGREKYFCNGLESNIDHS-AEAEVLVFSDER--CLGLAEITDKKRLVPKR 297

Query: 307 LV 308
           ++
Sbjct: 298 IL 299