Pairwise Alignments

Query, 132 a.a., ribosome-binding factor A from Vibrio cholerae E7946 ATCC 55056

Subject, 133 a.a., 30S ribosome-binding factor RbfA from Erwinia tracheiphila SCR3

 Score =  145 bits (367), Expect = 2e-40
 Identities = 78/133 (58%), Positives = 102/133 (76%), Gaps = 2/133 (1%)

Query: 1   MPKEFSRTQRVAQQLQKELAMILQREVRDSRLGM-VTISDVEVSRDLAYAKVFVTFLCIG 59
           M KEF R QRV+Q+LQKE+A+ILQRE++D RLGM VT+S V+VSRDLAYAKVFVTFL   
Sbjct: 1   MAKEFGRPQRVSQELQKEIAIILQREIKDPRLGMMVTVSGVDVSRDLAYAKVFVTFLNDK 60

Query: 60  EQTP-ESCLAALREHEVQIRMMLGKQIRLRLTPEIRFYYDNTLVEGMRMSNLVTEVINSD 118
           ++   ++ L AL +    IR +LGK +RLR+ PE+ F+YDN+LVEGMRMSNLVT V+ +D
Sbjct: 61  DEDEIKAGLRALADASGYIRTLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTNVVRND 120

Query: 119 KRRKHEAGRDEDE 131
             R+  A  D++E
Sbjct: 121 AERRGSAEEDKEE 133