Pairwise Alignments

Query, 898 a.a., translation initiation factor IF-2 from Vibrio cholerae E7946 ATCC 55056

Subject, 841 a.a., translation initiation factor IF-2 from Pseudomonas simiae WCS417

 Score =  912 bits (2358), Expect = 0.0
 Identities = 507/906 (55%), Positives = 637/906 (70%), Gaps = 74/906 (8%)

Query: 1   MTQITVKALSEEIGTPVDRLLEQLADAGMNKAVADH-VSEDEKQKLLAHLRKEHGDATGS 59
           MTQ+TVK L++E+ TPV+RLL+Q+ +AG+    AD  VS+ EKQ LL HL+  H  A   
Sbjct: 1   MTQVTVKQLADEVKTPVERLLQQMREAGLPHTAADEGVSDSEKQSLLTHLKSSH-KAKVE 59

Query: 60  EPTRLTLQRKTRSTLSVNAGGGKSKNVQVEVRKKRTYVKRSSVEDEATREAEEAAMRAAE 119
           EP ++TLQRKT STL V AG   SK++ VEVRKK+ +V+RS  E EA R           
Sbjct: 60  EPRKITLQRKTTSTLRV-AG---SKSISVEVRKKKVFVQRSPEEIEAER----------- 104

Query: 120 EQAKREAEEAAQRAAEEKAKREAEEAAKREAE--AKRMAEEKAKRETQAATQPRSDEEKL 177
              KRE EE  +RA E  A+++AEE AKR AE  A+R         T+A   P +  E +
Sbjct: 105 ---KRELEE--RRAVENAARQKAEEEAKRRAEEEARRQPAAAQPAGTEAVAAPAAPVEAV 159

Query: 178 KQEA--ARKEAEALKRRQEEEARR----KAEEESRRQLEKVRELAEKNGERWSADKETVG 231
           ++ A  A   A A   R+ +E RR    +A++ +RR           +GER         
Sbjct: 160 REAAPVAAAPAPAADARKRDEPRRPDKPRADDNNRRG-------GGGDGER--------- 203

Query: 232 DMQENTDYHVTTSRYAREAEDEADLHEEGARRRSTKANKRKMSSRDDNQERDSRPRGGKA 291
                           + A   A + E        KA   +++ R  ++E D   RGG+ 
Sbjct: 204 ----------------KNAPHRASVKE--------KAPAPRVAPRTTDEESDGFRRGGRG 239

Query: 292 GRKGRINKPMSMQHGFDKTAVVAKADVVVGETIVVSELAQKMSVKATEVIKVMMKMGAMA 351
             K ++ K  +  HGF         +V +GETI V +LAQ+MSVKA E+IK M K+G  A
Sbjct: 240 --KAKLKKRNA--HGFQSPTGPVVREVKIGETITVGDLAQQMSVKAAEIIKFMFKLGTPA 295

Query: 352 TINQVIDQETAQLVAEEMGHKVVLRKENELEEAILSDRDDKFEEVSRAPVVTIMGHVDHG 411
           TINQV+DQETAQLVAEE+GHKV L  +  LE+++      + E VSRAPVVT+MGHVDHG
Sbjct: 296 TINQVLDQETAQLVAEELGHKVTLVSDTALEDSLAESLKFEGEAVSRAPVVTVMGHVDHG 355

Query: 412 KTSTLDYIRRTHVASGEAGGITQHIGAYHVETPNGMITFLDTPGHAAFTAMRARGAQATD 471
           KTS LDYIRR  VA+GEAGGITQHIGAYHVET  GM+TFLDTPGHAAFTAMRARGA+ATD
Sbjct: 356 KTSLLDYIRRAKVAAGEAGGITQHIGAYHVETDRGMVTFLDTPGHAAFTAMRARGAKATD 415

Query: 472 IVVLVVAADDGVMPQTVEAIQHAKAAGVPLIVAVNKIDKDTANPDNVKTELSQYNVMPEE 531
           IV+LVVAADDGVMPQT+EA+QHAKAAGVPL+VAVNKIDK  A+ D +++ELS + V  EE
Sbjct: 416 IVILVVAADDGVMPQTIEAVQHAKAAGVPLVVAVNKIDKPGADLDRIRSELSVHGVTSEE 475

Query: 532 WGGDNMFVHISAKQGTNIDGLLEAILLQAEVLELKAVKQGMASGVVIESRLDKGRGPVAT 591
           WGGD  FV +SAK GT +D LLEA+LLQAEVLEL A       GVV+ESRLDKGRGPVAT
Sbjct: 476 WGGDTPFVPVSAKMGTGVDELLEAVLLQAEVLELTATPSAPGRGVVVESRLDKGRGPVAT 535

Query: 592 VLVQSGTLRKGDIVLCGQEYGRVRAMRDEVGNEVEEAGPSIPVEILGLSGVPAAGDEATV 651
           VLVQ GTLR+GD+VL G  YGRVRAM DE G  ++EAGP+IPVEILGL G P AGDE +V
Sbjct: 536 VLVQDGTLRQGDMVLVGSNYGRVRAMLDENGKPIKEAGPAIPVEILGLDGTPDAGDEMSV 595

Query: 652 VRDERKAREVANYRAGKFREVKLARQQKSKLENMFSNMTAGDVAELNIVLKADVQGSVEA 711
           V DE+KAREVA +R GKFREVKLAR    KLEN+F NM   +   LNIVLK+DV+GS+EA
Sbjct: 596 VADEKKAREVALFRQGKFREVKLARAHAGKLENIFENMGQEEKKTLNIVLKSDVRGSLEA 655

Query: 712 IADSLTKLSTDEVKVNIVGSGVGGITETDAVLAAASNAIVVGFNVRADASARRMIEAENI 771
           +  +L  L  DEV+V +VG GVGGITE+DA LA ASNA++ GFNVRADA AR+++E E +
Sbjct: 656 LNGALNGLGNDEVQVRVVGGGVGGITESDANLALASNAVLFGFNVRADAGARKIVEQEGL 715

Query: 772 DLRYYSIIYQLIDEVKQAMSGMLSPEFKQEIIGLAEVRDVFKSPKLGAIAGCMVTEGVIK 831
           D+RYY++IY +I++VK+A++GML  + ++ I+G+AEVRDVF+SPK GAIAGCMV EGV+ 
Sbjct: 716 DMRYYNVIYDIIEDVKKALTGMLGSDVRENILGIAEVRDVFRSPKFGAIAGCMVVEGVVH 775

Query: 832 RNAPIRVLRDNVVIYEGELESLRRFKDDVAEVKNGYECGIGVKNYNDVRVGDQIEVFETI 891
           RN PIRVLR+++VI+EGELESLRRFKDD +EV+ G ECGIGVK+YNDV+VGD+IEVFE +
Sbjct: 776 RNRPIRVLREDIVIFEGELESLRRFKDDASEVRAGMECGIGVKSYNDVKVGDKIEVFEKV 835

Query: 892 EIQRTI 897
           ++ R++
Sbjct: 836 QVARSL 841