Pairwise Alignments

Query, 898 a.a., translation initiation factor IF-2 from Vibrio cholerae E7946 ATCC 55056

Subject, 993 a.a., Translation initiation factor 2 from Variovorax sp. SCN45

 Score =  811 bits (2095), Expect = 0.0
 Identities = 480/1002 (47%), Positives = 621/1002 (61%), Gaps = 114/1002 (11%)

Query: 1   MTQITVKALSEEIGTPVDRLLEQLADAGMNKAVA-DHVSEDEKQKLLAHLRKEHGDATGS 59
           M+  TV   + E+    + LL+QL  AG+ KA A D ++E +KQ+LL HL+  HG     
Sbjct: 1   MSSTTVAEFANELKKTPETLLDQLKSAGVPKAAATDALTEADKQRLLGHLKASHGTVE-P 59

Query: 60  EPTRLTLQRKTRSTLSVNAGGGKSKNVQVEVRKKRTYVKRSSVEDEATREA--------- 110
           E  ++TL +K+ S +      G+++ +QVEVRKKRT+++R      +   A         
Sbjct: 60  ERKKITLTKKSTSEIKQADATGRARTIQVEVRKKRTFIQREDGHPASPEAAPQVAEAPAA 119

Query: 111 -------EEAAMRAAEEQAKREAE-------------------EAAQRAAEEKAKR--EA 142
                  +EA +   EE+A+R+AE                   EA +R   EKA+R  +A
Sbjct: 120 APAAPRVDEAELARREEEARRQAELIRRQEEELAEKRRLREEAEAREREQAEKAERAEQA 179

Query: 143 EEAAKREAEAKRMAEEKAKRETQA----------------------ATQPRSDEEKLKQE 180
           E+ A R A  K+ A E A     A                      A Q  +D +   Q 
Sbjct: 180 EQEAARVAAEKKAAAEAAAAAAAAKNTPAKPAAPAPAPAVTAAAAAAEQQAADTKLAAQN 239

Query: 181 AARKEAEALKRRQEEEARRKAEEESRRQLEKVRELAEKNGERWSADKETVGDMQENTDYH 240
           AA +  E  K +   E++ +A+EE+ R     ++L E+   +  A+ E +  M  N    
Sbjct: 240 AATQAKEDAKAKAAAESKARADEEAAR----AKDLDERR-RKALAEAEAIRAMM-NAPAR 293

Query: 241 VTTSRYARE------AEDEADLHEE-------------------------GARRRSTK-- 267
           V     A E      A  +  LH+                          G   +S K  
Sbjct: 294 VLVPHKAPEKPQPEKAAVKGTLHKPATPAARPGAPAAPGAAAAPGAAAGAGKEVKSAKLS 353

Query: 268 -------ANKRKMSSRDDNQERDSRP--RGGKAGRKGRINKPMSMQHGFDKTAVVAKADV 318
                  A K+++ +R D      R   RGG  GR+G        QH           +V
Sbjct: 354 SSWAGDPAKKKEIKTRGDASGGVGRGNWRGGPRGRRGNDRGGHDEQHAPAAPVEARILEV 413

Query: 319 VVGETIVVSELAQKMSVKATEVIKVMMKMGAMATINQVIDQETAQLVAEEMGHKVVLRKE 378
            V ETI V+ELA KM+VKA EVIK +MK+G MATINQ +DQ+TA ++ EEMGH  V+   
Sbjct: 414 HVPETITVAELAHKMAVKAQEVIKQLMKLGQMATINQSLDQDTAMILVEEMGHNAVVAAL 473

Query: 379 NELEEAILSDRD---DKFEEVSRAPVVTIMGHVDHGKTSTLDYIRRTHVASGEAGGITQH 435
           ++ E    +D D      E + RAPVVT+MGHVDHGKTS LDYIRR  VA+GEAGGITQH
Sbjct: 474 DDPEA--FTDEDVSAQTAEALPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQH 531

Query: 436 IGAYHVETPNGMITFLDTPGHAAFTAMRARGAQATDIVVLVVAADDGVMPQTVEAIQHAK 495
           IGAYHVET  GM++FLDTPGH AFTAMRARGAQATDIV+LVVAADDGVMPQT EAI+HAK
Sbjct: 532 IGAYHVETERGMVSFLDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAK 591

Query: 496 AAGVPLIVAVNKIDKDTANPDNVKTELSQYNVMPEEWGGDNMFVHISAKQGTNIDGLLEA 555
           AAGVP++VA+NK+DK  AN D VK EL    V+PEE+GGD  FV +SAK G  ID LLE 
Sbjct: 592 AAGVPIVVAINKVDKPDANLDRVKQELVAEEVVPEEYGGDVPFVPVSAKTGQGIDDLLEQ 651

Query: 556 ILLQAEVLELKAVKQGMASGVVIESRLDKGRGPVATVLVQSGTLRKGDIVLCGQEYGRVR 615
           +LLQAEVLELKA     A G+VIE++LDKGRGPVATVLVQSGTL+ GD+VL G  YGRVR
Sbjct: 652 VLLQAEVLELKAPVDAAAKGLVIEAQLDKGRGPVATVLVQSGTLKTGDVVLAGSTYGRVR 711

Query: 616 AMRDEVGNEVEEAGPSIPVEILGLSGVPAAGDEATVVRDERKAREVANYRAGKFREVKLA 675
           AM DE G   + AGPSIPVEI GL+ VP AGDE  V+ DER+ARE+A YRAGKFR  KLA
Sbjct: 712 AMLDEDGKATKAAGPSIPVEIQGLTEVPQAGDEFMVMSDERRAREIATYRAGKFRNTKLA 771

Query: 676 RQQKSKLENMFSNMTAGDVAELNIVLKADVQGSVEAIADSLTKLSTDEVKVNIVGSGVGG 735
           + Q + L+NMF++++AG+V  L I++KADVQGS EA+A SL KL+TDEVKV +V +GVGG
Sbjct: 772 KAQAANLQNMFTDLSAGEVQTLRIIIKADVQGSQEALAQSLLKLATDEVKVQVVYAGVGG 831

Query: 736 ITETDAVLAAASNAIVVGFNVRADASARRMIEAENIDLRYYSIIYQLIDEVKQAMSGMLS 795
           I+E+D  LA AS A+V+GFNVRADA AR++ E   + L YYSIIY  +DE+K AMSGML+
Sbjct: 832 ISESDINLAIASKAVVIGFNVRADAGARKLAEGNGVQLNYYSIIYDAVDEIKVAMSGMLA 891

Query: 796 PEFKQEIIGLAEVRDVFKSPKLGAIAGCMVTEGVIKRNAPIRVLRDNVVIYEGELESLRR 855
           PE ++EIIG AE+R VF + K+G +AG  +T G + R+A  R+LRDNVV+Y GE++S++R
Sbjct: 892 PERREEIIGSAEIRTVFVASKIGTVAGSYITSGSVNRSAHFRLLRDNVVVYTGEVDSIKR 951

Query: 856 FKDDVAEVKNGYECGIGVKNYNDVRVGDQIEVFETIEIQRTI 897
            KDDV EV+ G+ECGI +KNYND++ GDQ+E FE  EI RT+
Sbjct: 952 MKDDVREVREGFECGIKLKNYNDIKEGDQLEFFEIKEIARTL 993