Pairwise Alignments

Query, 898 a.a., translation initiation factor IF-2 from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., selenocysteyl-tRNA-specific translation elongation factor from Pseudomonas putida KT2440

 Score = 89.7 bits (221), Expect = 5e-22
 Identities = 79/252 (31%), Positives = 121/252 (48%), Gaps = 25/252 (9%)

Query: 401 VVTIMGHVDHGKTSTLDYIRRTHVASGEAG---------GITQHIGAYHVETPNG--MIT 449
           +V   GH+DHGKT+ L  +      +G+AG         G+T  +G  +     G  +  
Sbjct: 2   IVGTAGHIDHGKTALLLAL------TGQAGDQRQEERARGMTIDLGYRYAALSEGAPLTG 55

Query: 450 FLDTPGHAAFTAMRARGAQATDIVVLVVAADDGVMPQTVEAIQHAKAAGVP-LIVAVNKI 508
           F+D PGH  F      GA   D+V+LVVAADDGVMPQT E +   +  G+P  +VA++K 
Sbjct: 56  FIDVPGHERFIHNMLAGAHGIDLVLLVVAADDGVMPQTREHLAIIELLGIPQALVAISKC 115

Query: 509 DK-DTANPDNVKTELSQYNVMPEEWGGDNMFVHISAKQGTNIDGLLEAILLQAEVLELKA 567
           D+ + +    V+ ++S+  + P  + G   F  +S+  G  +D L +A LL+AE    + 
Sbjct: 116 DRVEPSRLAEVQMQVSEL-LAPGPYAGARQF-PLSSISGEGVDALRQA-LLEAEAGTRQR 172

Query: 568 VKQGMASGVVIESRLDKGRGPVATVLVQSGTLRKGDIVLCGQEYGRVRAMRDEVGNE--- 624
              G     V  +    G G V T    +G +  GD +L G+    VR       N+   
Sbjct: 173 SVVGGFRLAVDRAFAVTGAGVVVTGTALAGRVSAGDTLLLGKAGKVVRVRGLHAQNQAAL 232

Query: 625 VEEAGPSIPVEI 636
           V EAG  + + I
Sbjct: 233 VAEAGQRVALNI 244