Pairwise Alignments

Query, 898 a.a., translation initiation factor IF-2 from Vibrio cholerae E7946 ATCC 55056

Subject, 842 a.a., Translation initiation factor IF-2 from Pseudomonas sp. DMC3

 Score =  909 bits (2349), Expect = 0.0
 Identities = 503/900 (55%), Positives = 638/900 (70%), Gaps = 61/900 (6%)

Query: 1   MTQITVKALSEEIGTPVDRLLEQLADAGMNKAVAD-HVSEDEKQKLLAHLRKEHGDATGS 59
           MTQ+TVK L++E+ TPV+RLL+Q+ +AG+    AD +V++ EKQ LL HL+  H  A   
Sbjct: 1   MTQVTVKQLADEVKTPVERLLQQMREAGLPHTAADENVTDSEKQSLLTHLKSSH-KAKVE 59

Query: 60  EPTRLTLQRKTRSTLSVNAGGGKSKNVQVEVRKKRTYVKRSSVEDEATREAEEAAMRAAE 119
           EP ++TLQRKT STL V AG   SK++ VEVRKK+ +V+RS  E EA R           
Sbjct: 60  EPRKITLQRKTTSTLRV-AG---SKSISVEVRKKKVFVQRSPEEIEAER----------- 104

Query: 120 EQAKREAEEAAQRAAEEKAKREAEEAAKREAEAKRMAEEKAKRETQAATQPRSDEEKLKQ 179
              KRE +E  +RA E  A+++AEE      EAK+ AEE+A+R+  AA    SD      
Sbjct: 105 ---KRELDE--RRAVENAARQKAEE------EAKQRAEEEARRQPAAAQTAASDAVAAPA 153

Query: 180 EAAR--KEAEALKRRQEEEARRKAEEESRRQLEKVRELAEKNGERWSADKETVGDMQENT 237
            AA   +E+  +       A  + ++  +R+ +K R  A+ N  R        GD +   
Sbjct: 154 AAAEPVRESAPVAAAPAPSADVRNKQNEQRRPDKPR--ADDNNRRSGG-----GDGER-- 204

Query: 238 DYHVTTSRYAREAEDEADLHEEGARRRSTKANKRKMSSRDDNQERDSRPRGGKAGRKGRI 297
                     + A   A + E        KA   +++ R  ++E D   RGG+   K ++
Sbjct: 205 ----------KNAPHRASVKE--------KAPAPRVAPRTTDEESDGFRRGGRG--KAKL 244

Query: 298 NKPMSMQHGFDKTAVVAKADVVVGETIVVSELAQKMSVKATEVIKVMMKMGAMATINQVI 357
            K  +  HGF         DV +GETI V +LA +MSVKA E+IK M K+G  ATINQV+
Sbjct: 245 KKRNA--HGFQSPTGPVVRDVQIGETITVGDLANQMSVKAAEIIKFMFKLGTPATINQVL 302

Query: 358 DQETAQLVAEEMGHKVVLRKENELEEAILSDRDDKFEEVSRAPVVTIMGHVDHGKTSTLD 417
           DQETAQLVAEE+GHKV L  +  LE+++      + E  SRAPVVT+MGHVDHGKTS LD
Sbjct: 303 DQETAQLVAEELGHKVTLVSDTALEDSLAESLKFEGESFSRAPVVTVMGHVDHGKTSLLD 362

Query: 418 YIRRTHVASGEAGGITQHIGAYHVETPNGMITFLDTPGHAAFTAMRARGAQATDIVVLVV 477
           YIRR  VA+GEAGGITQHIGAYHVET  GM+TFLDTPGHAAFTAMRARGA+ATDIV+LVV
Sbjct: 363 YIRRAKVAAGEAGGITQHIGAYHVETDRGMVTFLDTPGHAAFTAMRARGAKATDIVILVV 422

Query: 478 AADDGVMPQTVEAIQHAKAAGVPLIVAVNKIDKDTANPDNVKTELSQYNVMPEEWGGDNM 537
           AADDGVMPQT+EA+QHA+AAGVPL+VAVNKIDK  A+ D +++ELS + V  E+WGGD  
Sbjct: 423 AADDGVMPQTIEAVQHAQAAGVPLVVAVNKIDKPGADLDRIRSELSVHGVTSEDWGGDTP 482

Query: 538 FVHISAKQGTNIDGLLEAILLQAEVLELKAVKQGMASGVVIESRLDKGRGPVATVLVQSG 597
           FV +SAK GT +D LLEA+LLQAEVLELKA       GVV+ESRLDKGRGPVATVLVQ G
Sbjct: 483 FVPVSAKMGTGVDELLEAVLLQAEVLELKATPSAPGRGVVVESRLDKGRGPVATVLVQDG 542

Query: 598 TLRKGDIVLCGQEYGRVRAMRDEVGNEVEEAGPSIPVEILGLSGVPAAGDEATVVRDERK 657
           TLR+GD+VL G  YGRVRAM DE G  ++EAGPSIPVEILGL G P AGDE +VV DE+K
Sbjct: 543 TLRQGDMVLVGSNYGRVRAMLDENGKPIKEAGPSIPVEILGLDGTPDAGDEMSVVADEKK 602

Query: 658 AREVANYRAGKFREVKLARQQKSKLENMFSNMTAGDVAELNIVLKADVQGSVEAIADSLT 717
           AREVA +R GKFREVKLAR    KLEN+F NM   +   LNIVLK+DV+GS+EA+  +L 
Sbjct: 603 AREVALFRQGKFREVKLARAHAGKLENIFENMGQAEKKTLNIVLKSDVRGSLEALNGALN 662

Query: 718 KLSTDEVKVNIVGSGVGGITETDAVLAAASNAIVVGFNVRADASARRMIEAENIDLRYYS 777
            L  DEV+V +VG GVGGITE+DA LA ASNA++ GFNVRADA AR+++E E +D+RYY+
Sbjct: 663 GLGNDEVQVRVVGGGVGGITESDANLALASNAVLFGFNVRADAGARKIVEQEGLDMRYYN 722

Query: 778 IIYQLIDEVKQAMSGMLSPEFKQEIIGLAEVRDVFKSPKLGAIAGCMVTEGVIKRNAPIR 837
           +IY +I++VK+A++GML  + ++ I+G+AEVRDVF+SPK GAIAGCMV EGV+ RN PIR
Sbjct: 723 VIYDIIEDVKKALTGMLGSDVRENILGVAEVRDVFRSPKFGAIAGCMVIEGVVHRNRPIR 782

Query: 838 VLRDNVVIYEGELESLRRFKDDVAEVKNGYECGIGVKNYNDVRVGDQIEVFETIEIQRTI 897
           VLR+++VI+EGELESLRRFKDD +EV+ G ECGIGVK+YNDV+VGD+IEVFE +++ R++
Sbjct: 783 VLREDIVIFEGELESLRRFKDDASEVRAGMECGIGVKSYNDVKVGDKIEVFEKVQVARSL 842