Pairwise Alignments

Query, 898 a.a., translation initiation factor IF-2 from Vibrio cholerae E7946 ATCC 55056

Subject, 892 a.a., Translation initiation factor 2 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 1206 bits (3121), Expect = 0.0
 Identities = 656/909 (72%), Positives = 738/909 (81%), Gaps = 30/909 (3%)

Query: 1   MTQITVKALSEEIGTPVDRLLEQLADAGMNKAVADHVSEDEKQKLLAHLRKEHGDATGSE 60
           MT +T+KAL+ E    VDRL++Q ADAG+ K+  D VS  EKQ LLAHL +E      S 
Sbjct: 1   MTDVTLKALAAERQVSVDRLVQQFADAGIRKSADDSVSAQEKQTLLAHLNRE----AVSG 56

Query: 61  PTRLTLQRKTRSTLSVNAGGGKSKNVQVEVRKKRTYVKRSSVEDEATREAEEAAMRAAEE 120
           P +LTLQRKTRSTL++   GGKSK+VQ+EVRKKRT+VKR   E E    AEE A R AEE
Sbjct: 57  PDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERLA-AEEQAQREAEE 115

Query: 121 QAKREAEEAAQRAAEEKAKREAEEAAKREA--EAKRMAEEKAKRETQAATQPRSDEEKLK 178
           QA+REAEE A+R A++KA+REA E AKREA  +AKR A EK K     + Q   D  K  
Sbjct: 116 QARREAEEQAKREAQQKAEREAAEQAKREAAEKAKREAAEKDK----VSNQQTDDMTKTA 171

Query: 179 Q-EAARKEAEA--LKRRQEEEARRKAEEESRRQLEKVRELAEKNGERWSADKETVGDMQE 235
           Q E AR+E EA  LKR+ EEEARRK EEE+RR  E+ R +AE+N  +W+A  E V D   
Sbjct: 172 QAEKARRENEAAELKRKAEEEARRKLEEEARRVAEEARRMAEEN--KWTATPEPVED--- 226

Query: 236 NTDYHVTTSRYAREAEDEADLHEEGARRRSTKANKRKMS-------SRDDNQERDSRPRG 288
            +DYHVTTS++AR+AEDE D   EG R R   A   + +       S+ D +E  +  RG
Sbjct: 227 TSDYHVTTSQHARQAEDENDREVEGGRGRGRNAKAARPAKKGKHAESKADREEARAAVRG 286

Query: 289 GKAGRKGRINKPMSMQHGFDKTAVVAKADVVVGETIVVSELAQKMSVKATEVIKVMMKMG 348
           GK G++    K  S+Q GF K A     DVV+GETI V ELA KM+VK ++VIK MMK+G
Sbjct: 287 GKGGKR----KGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLG 342

Query: 349 AMATINQVIDQETAQLVAEEMGHKVVLRKENELEEAILSDRDDKFEEVSRAPVVTIMGHV 408
           AMATINQVIDQETAQLVAEEMGHKV+LR+ENELEEA++SDRD       RAPVVTIMGHV
Sbjct: 343 AMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHV 402

Query: 409 DHGKTSTLDYIRRTHVASGEAGGITQHIGAYHVETPNGMITFLDTPGHAAFTAMRARGAQ 468
           DHGKTS LDYIR T VASGEAGGITQHIGAYHVET NGMITFLDTPGHAAFT+MRARGAQ
Sbjct: 403 DHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETDNGMITFLDTPGHAAFTSMRARGAQ 462

Query: 469 ATDIVVLVVAADDGVMPQTVEAIQHAKAAGVPLIVAVNKIDKDTANPDNVKTELSQYNVM 528
           ATDIVVLVVAADDGVMPQT+EAIQHAKAAGVP++VAVNKIDK  A+PD VK ELSQY ++
Sbjct: 463 ATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDKPEADPDRVKNELSQYGIL 522

Query: 529 PEEWGGDNMFVHISAKQGTNIDGLLEAILLQAEVLELKAVKQGMASGVVIESRLDKGRGP 588
           PEEWGG++ FVH+SAK GT ID LL+AILLQAEVLELKAV++GMASG VIES LDKGRGP
Sbjct: 523 PEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMASGAVIESFLDKGRGP 582

Query: 589 VATVLVQSGTLRKGDIVLCGQEYGRVRAMRDEVGNEVEEAGPSIPVEILGLSGVPAAGDE 648
           VATVLV+ GTL KGDIVLCG EYGRVRAMR+E+G EV EAGPSIPVEILGLSGVPAAGDE
Sbjct: 583 VATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDE 642

Query: 649 ATVVRDERKAREVANYRAGKFREVKLARQQKSKLENMFSNMTAGDVAELNIVLKADVQGS 708
            TVVRDE+KAREVA YR GKFREVKLARQQKSKLENMF+NMT G+V E+NIVLKADVQGS
Sbjct: 643 VTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGS 702

Query: 709 VEAIADSLTKLSTDEVKVNIVGSGVGGITETDAVLAAASNAIVVGFNVRADASARRMIEA 768
           VEAI+DSL KLSTDEVKV I+GSGVGGITETDA LAAASNAI+VGFNVRADASAR++IE+
Sbjct: 703 VEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASNAILVGFNVRADASARKVIES 762

Query: 769 ENIDLRYYSIIYQLIDEVKQAMSGMLSPEFKQEIIGLAEVRDVFKSPKLGAIAGCMVTEG 828
           E++DLRYYS+IY LIDEVK AMSGMLSPE KQ+IIGLAEVRDVFKSPK GAIAGCMVTEG
Sbjct: 763 ESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLAEVRDVFKSPKFGAIAGCMVTEG 822

Query: 829 VIKRNAPIRVLRDNVVIYEGELESLRRFKDDVAEVKNGYECGIGVKNYNDVRVGDQIEVF 888
            IKR+ PIRVLRDNVVIYEGELESLRRFKDDV EV+NG ECGIGVKNYNDVRVGD IEVF
Sbjct: 823 TIKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRVGDMIEVF 882

Query: 889 ETIEIQRTI 897
           E IEIQRTI
Sbjct: 883 EIIEIQRTI 891