Pairwise Alignments

Query, 898 a.a., translation initiation factor IF-2 from Vibrio cholerae E7946 ATCC 55056

Subject, 999 a.a., translation initiation factor IF-2 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  633 bits (1632), Expect = 0.0
 Identities = 383/939 (40%), Positives = 545/939 (58%), Gaps = 67/939 (7%)

Query: 5   TVKALSEEIGTPVDRLLEQLADAGMNKAVADHVSEDEKQKLLAHLRKEHGDATGSEPTRL 64
           T+KA SE +  P +   E+ A     +  A   + +++ K+ +   K  G        ++
Sbjct: 78  TIKAESESV--PEEAKKEEPAQPAPKQEEAPKKAPEKEDKVTSEAEKLPGIKVLG---KI 132

Query: 65  TLQRKTRSTLSVNAGGGKSKNVQVEVRKKRTYVKRSSVEDEATREAE--EAAMRAAEEQA 122
            L  K +          K +  Q E   K+   ++  V++EA + A+  E A   A E+ 
Sbjct: 133 DLSDKKQDKKEAPQ---KEEPKQKEAAPKQE--EKKPVQEEAPKAAKPAEKAPEKAVEKP 187

Query: 123 KREAEEAAQRAAEEKAKREAEEAAKREAEAKRMAEEKAKRETQAATQPRSDEEKLKQEAA 182
           K E+ +A +   +E AK    EA K +        +K +   + AT P  D++   + A+
Sbjct: 188 KDESPKAEKSEQKENAKPSTPEAGKPQESNDASKGQKQQPAEKPATPPSDDKKPQAKPAS 247

Query: 183 R--KEAEALKRRQEEEARR-----------------KAEEESRRQLEKVRELA------- 216
              KEA+    + E++A                   K E    R  +K + +A       
Sbjct: 248 SDSKEAKETPPQGEKDASGNVISAKADALKGLTVLGKIELPKDRPKKKAKPVASSDERNK 307

Query: 217 -EKNGERWSADKETVGDMQENTDYHVTTSRYAREAEDEADLHEEGARRRS---------- 265
            +K   R   DK   G  Q         +R         D   +G R+R           
Sbjct: 308 DKKKRPRKRIDKPGTGGPQGG-------NRGGGPQGGRGDNRNQGGRKRPGGNNKGGGKG 360

Query: 266 ----TKANKRKMSSRDDNQERDSRPRGGK---AGRKGRINKPMSMQHGFDKTAVVAKADV 318
                KA   +   +D  ++  +R +GG     G+K R +K            +     +
Sbjct: 361 GNRFQKAEPTQKEIQDQIKQTLARLQGGGKSGGGKKTRRDKQRERAKDQQSEGIEESKVL 420

Query: 319 VVGETIVVSELAQKMSVKATEVIKVMMKMGAMATINQVIDQETAQLVAEEMGHKVVLRKE 378
            V E I  ++LA  + V   E+I V M +G   +INQ +D E   ++A+E G++V   K 
Sbjct: 421 KVTEFISANDLASLLDVSVNEIISVCMSLGMFVSINQRLDAEAITIIADEFGYEVEFTKA 480

Query: 379 NELEEAILSDRDDKFEEVS-RAPVVTIMGHVDHGKTSTLDYIRRTHVASGEAGGITQHIG 437
           +E EE  + + +D  E++  RAP+VTIMGHVDHGKTS LDYIR + V SGEAGGITQHIG
Sbjct: 481 DEEEE--VEEVEDSPEDLGDRAPIVTIMGHVDHGKTSLLDYIRSSKVTSGEAGGITQHIG 538

Query: 438 AYHVETPNG-MITFLDTPGHAAFTAMRARGAQATDIVVLVVAADDGVMPQTVEAIQHAKA 496
           AY V T NG  I FLDTPGH AFTAMRARGA+ TD+ ++V+AADD +MPQT EAI HA+ 
Sbjct: 539 AYDVRTDNGDKIAFLDTPGHEAFTAMRARGAKITDVAIIVIAADDSIMPQTKEAINHAQV 598

Query: 497 AGVPLIVAVNKIDKDTANPDNVKTELSQYNVMPEEWGGDNMFVHISAKQGTNIDGLLEAI 556
           AGVP+I A+NKIDK  ANP+ +K EL+  N++ E+WGG      ISAK G  +D LLE +
Sbjct: 599 AGVPMIFAINKIDKPNANPNKIKEELANMNLLVEDWGGKYQSQEISAKTGQGVDELLEKV 658

Query: 557 LLQAEVLELKAVKQGMASGVVIESRLDKGRGPVATVLVQSGTLRKGDIVLCGQEYGRVRA 616
           LL+AE+LELKA     A G V+E+ LDKGRG V+TV++Q+GTL+ GDI+L GQ YGRV+A
Sbjct: 659 LLEAEILELKANPDRKAMGTVVEASLDKGRGYVSTVMIQNGTLKIGDIMLAGQHYGRVKA 718

Query: 617 MRDEVGNEVEEAGPSIPVEILGLSGVPAAGDEATVVRDERKAREVANYRAGKFREVKLAR 676
           M D +G +V+EA PS PV++LGLSG P AGD   V   ER+ARE+AN R    RE  +  
Sbjct: 719 MFDHLGQKVQEAEPSTPVQVLGLSGAPQAGDILKVYDTEREAREIANSREQINREQSMRT 778

Query: 677 QQKSKLENMFSNMTAGDVAELNIVLKADVQGSVEAIADSLTKLSTDEVKVNIVGSGVGGI 736
           ++   L+ +   +  G   ELNI++K DV GSVEA++DSL KLS DEV VNI+  GVG I
Sbjct: 779 KKHITLDEIGRRLAIGSFKELNIIIKGDVDGSVEALSDSLLKLSKDEVSVNIIHKGVGQI 838

Query: 737 TETDAVLAAASNAIVVGFNVRADASARRMIEAENIDLRYYSIIYQLIDEVKQAMSGMLSP 796
           +E+D +LA+AS+AI++GF VR  +SA+R+ E E I++R+YSIIY  I+++K A+ GML P
Sbjct: 839 SESDVLLASASDAIILGFQVRPSSSAKRLAEQEEIEIRHYSIIYDAINQIKDAIEGMLEP 898

Query: 797 EFKQEIIGLAEVRDVFKSPKLGAIAGCMVTEGVIKRNAPIRVLRDNVVIYEGELESLRRF 856
           EF++ I G  +VR+VFK  K+G +AG  VT+G + R   IRV+RD +VI++GE++ L+RF
Sbjct: 899 EFEEVITGNIQVREVFKISKVGTVAGSYVTDGYVTRKNKIRVIRDGIVIHDGEIDQLKRF 958

Query: 857 KDDVAEVKNGYECGIGVKNYNDVRVGDQIEVFETIEIQR 895
           KDDV+EVK GYECGI +K YND+++ D IE +E  E++R
Sbjct: 959 KDDVSEVKAGYECGISIKGYNDIKLEDTIEGYEMREVKR 997



 Score = 44.7 bits (104), Expect = 3e-08
 Identities = 67/327 (20%), Positives = 128/327 (39%), Gaps = 53/327 (16%)

Query: 9   LSEEIGTPVDRLLEQLADAGMNKAVADHVSEDEKQKLLAHLRKEHGDATGS--EPTRLTL 66
           ++ ++   +  ++E +A  G +  V  + +    Q+  + L KE   +     E + L++
Sbjct: 12  VARKLNVGISTIVESMAKKGFD--VESNPNSKISQEQFSMLAKEFKSSAQDKEEASHLSI 69

Query: 67  QRKTRSTLSVNAGGG-------KSKNVQVEVRKKRTYVKRSSVEDEATREAEEAAMRAAE 119
            ++   T ++ A          K +  Q   +++    K    ED+ T EAE+       
Sbjct: 70  GKRHNETFTIKAESESVPEEAKKEEPAQPAPKQEEAPKKAPEKEDKVTSEAEKLPGIKVL 129

Query: 120 EQAKREAEEAAQRAAEEKAKREAEEAAKREAEAKRMAEE--KAKRETQAATQPRSDEEKL 177
            +     ++  ++ A +K + + +EAA ++ E K + EE  KA +  + A  P    EK 
Sbjct: 130 GKIDLSDKKQDKKEAPQKEEPKQKEAAPKQEEKKPVQEEAPKAAKPAEKA--PEKAVEKP 187

Query: 178 KQEAARKEAEALKRRQEEEARRKAEEESRRQLEKVRELAEKNGERWSADKETVGDMQENT 237
           K E+ + E    K  Q+E A+    E  + Q       A K  ++  A+K       +  
Sbjct: 188 KDESPKAE----KSEQKENAKPSTPEAGKPQESND---ASKGQKQQPAEKPATPPSDDKK 240

Query: 238 DYHVTTSRYAREAEDEADLHEEGA------------------------RRRSTKANKRKM 273
                 S  ++EA++     E+ A                        + R  K  K   
Sbjct: 241 PQAKPASSDSKEAKETPPQGEKDASGNVISAKADALKGLTVLGKIELPKDRPKKKAKPVA 300

Query: 274 SSRDDNQERDSRPRGGKAGRKGRINKP 300
           SS + N+++  RPR        RI+KP
Sbjct: 301 SSDERNKDKKKRPR-------KRIDKP 320