Pairwise Alignments

Query, 151 a.a., ribosome maturation factor RimP from Vibrio cholerae E7946 ATCC 55056

Subject, 199 a.a., FIG000325: clustered with transcription termination protein NusA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 63.9 bits (154), Expect = 1e-15
 Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 29/158 (18%)

Query: 10  EMLEAPVVAAGYELVGLEFVRAGQHSTLRIFIDH-------------ENGITVEDCAEVS 56
           +++E  V   G++LV LE    G    LR+ ID              E  +TVEDC +V+
Sbjct: 5   DIVEQTVTGLGFDLVELERSAGG---LLRVTIDWPWAAPVEGQPMPAERFVTVEDCEKVT 61

Query: 57  RQVSAVLDVEDPISVVYN-LEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVG------ 109
           RQ+  +L+VE    + Y  LEV SPG++RPL +   Y +F G  V + LK  +G      
Sbjct: 62  RQLQYLLEVE---GLEYRRLEVGSPGIDRPLKREIDYVRFEGQVVDLTLKAPIGATGTDV 118

Query: 110 --NRRKWKGVIQ-SIDGETVAVMVDGQEEHFALSNISK 144
             NR+K++G ++ + DG    V+   + E      +SK
Sbjct: 119 AANRKKFRGTLERAADGVQWQVVWSDEPEPKPGQRVSK 156