Pairwise Alignments

Query, 651 a.a., ATP-dependent zinc metalloprotease FtsH from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., ATP-dependent metalloprotease from Pseudomonas simiae WCS417

 Score =  838 bits (2166), Expect = 0.0
 Identities = 433/621 (69%), Positives = 511/621 (82%), Gaps = 5/621 (0%)

Query: 4   MAKNLILWLVIAVVLMSVFQSFGPGENNGRAVDYTTFVKEVGQGQIQEAQFNNGEITFMR 63
           MAKNLILWL+IA VL++V  +F    N  + ++Y+ F+++V  G+++    +   IT  R
Sbjct: 1   MAKNLILWLIIAAVLVTVMNNFS-SPNEPQTLNYSDFIQQVKDGKVERVAVDGYVITGKR 59

Query: 64  RGGGSRYVTYMPVYDQKLLDDLINQDVKVQGTPPEEQSLLGTIFISWFPMILLIGVWIFF 123
             G S       + D  L+ DL++  V V+G  PE+QS+   + ++ FP++++I V++FF
Sbjct: 60  NDGDSFKTIRPAIQDNGLIGDLVDNHVVVEGKQPEQQSIWTQLLVASFPILVIIAVFMFF 119

Query: 124 MRQMQGG-GGKGA-MSFGKSKARMMSEDQIKTTFSDVAGCDEAKEDVKELVDYLRDPSRF 181
           MRQMQGG GGKG  MSFGKSKAR++SEDQ+KTT +DVAGCDEAKE+V ELV++LRDP +F
Sbjct: 120 MRQMQGGAGGKGGPMSFGKSKARLLSEDQVKTTLADVAGCDEAKEEVGELVEFLRDPGKF 179

Query: 182 QKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMF 241
           Q+LGG+IP GVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMF
Sbjct: 180 QRLGGRIPRGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMF 239

Query: 242 EQAKKASPCIIFIDEIDAVGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAAT 301
           EQAKK +PCIIFIDEIDAVGR RGAG+GGGHDEREQTLNQ+LVEMDGFE N+GIIVIAAT
Sbjct: 240 EQAKKHAPCIIFIDEIDAVGRHRGAGMGGGHDEREQTLNQLLVEMDGFEMNDGIIVIAAT 299

Query: 302 NRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFS 361
           NRPDVLDPALLRPGRFDRQVVVGLPD+RGREQILKVHMRKVP+ +DV P++IARGTPGFS
Sbjct: 300 NRPDVLDPALLRPGRFDRQVVVGLPDIRGREQILKVHMRKVPMGDDVAPAVIARGTPGFS 359

Query: 362 GADLANLVNEAALFAARGNKRNVSMVEFELAKDKIMMGAERRSMVMSEEIKESTAYHEAG 421
           GADLANLVNEA+LFAAR  KR V M EFELAKDKIMMGAER+SMVMSE+ K++TAYHEAG
Sbjct: 360 GADLANLVNEASLFAARTGKRIVEMKEFELAKDKIMMGAERKSMVMSEKEKQNTAYHEAG 419

Query: 422 HAVVGRLVPEHDPVYKVSIIPRGRALGVTMYLPEQDRVSMSKQHLESMISSLYGGRLAEE 481
           HA+VGR+VPEHDPVYKVSIIPRGRALGVTM+LPE+DR S+SK+ L S I SLYGGR+AEE
Sbjct: 420 HAIVGRVVPEHDPVYKVSIIPRGRALGVTMFLPEEDRYSLSKRALISQICSLYGGRIAEE 479

Query: 482 LIYGKEKVSTGASNDIERATEIARKMVTQWGFSEKLGPMLYAEDEGEVFLGR-SVTQTKH 540
           +  G + V+TGASNDI RA++IAR MVT+WG SEKLGP++YAE+EGEVFLGR    Q   
Sbjct: 480 MTLGFDGVTTGASNDIMRASQIARNMVTKWGLSEKLGPLMYAEEEGEVFLGRGGGGQNAS 539

Query: 541 MSDDTAKLIDDEVRQIIDRNYERARQIIMDNMDIMHAMKDALMKYETIDAGQIDDLMARK 600
            S +TAKLID EVR IID+ Y  A+QI+ DN D + AM DALMKYETIDA QIDD+MA +
Sbjct: 540 FSGETAKLIDSEVRSIIDQCYGTAKQILTDNRDKLDAMADALMKYETIDADQIDDIMAGR 599

Query: 601 PVIREPAGWGEQSKTPSAPEV 621
            V REP  W   S T   P V
Sbjct: 600 -VPREPRDWEGGSGTSGTPPV 619