Pairwise Alignments

Query, 651 a.a., ATP-dependent zinc metalloprotease FtsH from Vibrio cholerae E7946 ATCC 55056

Subject, 774 a.a., ATPase, AAA family from Variovorax sp. SCN45

 Score = 53.1 bits (126), Expect = 5e-11
 Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 8/118 (6%)

Query: 196 GPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFID 255
           G PGTGKT LA+ IA     P      SD +  +VG     +  MF +A+     ++ +D
Sbjct: 571 GAPGTGKTALAEHIAKALGRPLLVKQASDLMSKYVGETEQNMAAMFREAEN-EKAVLLLD 629

Query: 256 EIDAVGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLR 313
           E D+  + R    G         +N+ML  M+ F G    + +  TN  D LD A LR
Sbjct: 630 EADSFLQDRR---GAQRTYEVTEVNEMLQGMERFNG----VFVCTTNLLDRLDQAALR 680



 Score = 50.1 bits (118), Expect = 4e-10
 Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 49/268 (18%)

Query: 165 KEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEAKVPFF------ 218
           +ED + LV  LR     ++ G      VL+ GPPGTGKT LAK +A  A +  F      
Sbjct: 291 QEDAQMLVTLLRAAVARKEPG----VNVLLYGPPGTGKTELAKVVAQAAGLELFEVEYAD 346

Query: 219 ----TISGSD------FVEMFVGVGASRVRDMFEQAKKASPCII-----FIDEIDAVGRQ 263
               ++SG D        ++F+  G+++   +F++ +   P I      F+   + +   
Sbjct: 347 RDGNSLSGRDRYRSLQIAQVFL-KGSAQAALLFDEVEDVFPPISTEAAQFMARAEQIPAP 405

Query: 264 RGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVV 323
               V G     +  +NQ+L      E N  +  +  TNR + +DPA  R  RF   + +
Sbjct: 406 TSGSVSG-----KAWVNQIL------EANP-VPTLWVTNRIEQIDPAFRR--RFAYHLEL 451

Query: 324 GLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAARGNKRN 383
             P    REQ++K  +  V ++      L  R   G + A +   V  A L A   +   
Sbjct: 452 KSPPPGAREQLVKKTLEGVVVSEAFTAKLAER--KGLTPAQIRTAVRFAGL-AKTDDASV 508

Query: 384 VSMVEFELAKDKIMMG------AERRSM 405
            +++E +L    + +G       ERRS+
Sbjct: 509 EALIERQLRNADLALGTLDTGRGERRSV 536