Pairwise Alignments

Query, 651 a.a., ATP-dependent zinc metalloprotease FtsH from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., ATP-dependent zinc metalloprotease FtsH from Pseudomonas sp. DMC3

 Score =  843 bits (2179), Expect = 0.0
 Identities = 437/632 (69%), Positives = 517/632 (81%), Gaps = 7/632 (1%)

Query: 1   MSDMAKNLILWLVIAVVLMSVFQSFGPGENNGRAVDYTTFVKEVGQGQIQEAQFNNGEIT 60
           ++DMAKNLILWL+IA VL++V  +F    N  + ++Y+ F+++V  G+++    +   IT
Sbjct: 1   LNDMAKNLILWLIIAAVLVTVMNNFS-SPNEPQTLNYSDFIQQVKDGKVERVAVDGYVIT 59

Query: 61  FMRRGGGSRYVTYMPVYDQKLLDDLINQDVKVQGTPPEEQSLLGTIFISWFPMILLIGVW 120
             R  G S       + D  L+ DL++  V V+G  PE+QS+   + ++ FP++++I V+
Sbjct: 60  GKRTDGDSFKTIRPAIQDNGLIGDLVDNHVVVEGKQPEQQSIWTQLLVASFPILVIIAVF 119

Query: 121 IFFMRQMQGG-GGKGA-MSFGKSKARMMSEDQIKTTFSDVAGCDEAKEDVKELVDYLRDP 178
           +FFMRQMQGG GGKG  MSFGKSKAR++SEDQ+KTT +DVAGCDEAKE+V ELV++LRDP
Sbjct: 120 MFFMRQMQGGAGGKGGPMSFGKSKARLLSEDQVKTTLADVAGCDEAKEEVGELVEFLRDP 179

Query: 179 SRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVR 238
            +FQ+LGG+IP GVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVR
Sbjct: 180 GKFQRLGGRIPRGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVR 239

Query: 239 DMFEQAKKASPCIIFIDEIDAVGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVI 298
           DMFEQAKK +PCIIFIDEIDAVGR RGAG+GGGHDEREQTLNQ+LVEMDGFE N+GIIVI
Sbjct: 240 DMFEQAKKHAPCIIFIDEIDAVGRHRGAGMGGGHDEREQTLNQLLVEMDGFEMNDGIIVI 299

Query: 299 AATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTP 358
           AATNRPDVLDPALLRPGRFDRQVVVGLPD+RGREQILKVHMRKVP+ +DV P++IARGTP
Sbjct: 300 AATNRPDVLDPALLRPGRFDRQVVVGLPDIRGREQILKVHMRKVPMGDDVAPAVIARGTP 359

Query: 359 GFSGADLANLVNEAALFAARGNKRNVSMVEFELAKDKIMMGAERRSMVMSEEIKESTAYH 418
           GFSGADLANLVNEA+LFAAR  KR V M EFELAKDKIMMGAER+SMVMSE+ K++TAYH
Sbjct: 360 GFSGADLANLVNEASLFAARSGKRIVEMKEFELAKDKIMMGAERKSMVMSEKEKQNTAYH 419

Query: 419 EAGHAVVGRLVPEHDPVYKVSIIPRGRALGVTMYLPEQDRVSMSKQHLESMISSLYGGRL 478
           EAGHA+VGR+VPEHDPVYKVSIIPRGRALGVTM+LPE+DR S+SK+ L S I SLYGGR+
Sbjct: 420 EAGHAIVGRVVPEHDPVYKVSIIPRGRALGVTMFLPEEDRYSLSKRALISQICSLYGGRI 479

Query: 479 AEELIYGKEKVSTGASNDIERATEIARKMVTQWGFSEKLGPMLYAEDEGEVFLGR-SVTQ 537
           AEE+  G + V+TGASNDI RA++IAR MVT+WG SEKLGP++YAE+EGEVFLGR    Q
Sbjct: 480 AEEMTLGFDGVTTGASNDIMRASQIARNMVTKWGLSEKLGPLMYAEEEGEVFLGRGGGGQ 539

Query: 538 TKHMSDDTAKLIDDEVRQIIDRNYERARQIIMDNMDIMHAMKDALMKYETIDAGQIDDLM 597
               S +TAKLID EVR IID+ Y  A+QI+ DN D + AM DALMKYETIDA QIDD+M
Sbjct: 540 AASFSGETAKLIDSEVRSIIDQCYGTAKQILTDNRDKLDAMADALMKYETIDAEQIDDIM 599

Query: 598 A-RKPVIREPAGWGEQSKTPSAPEVKAEPEAK 628
           A R P  REP  W   + TP  P V  E   K
Sbjct: 600 AGRTP--REPRDWSGGTGTPPPPVVHDERPEK 629