Pairwise Alignments

Query, 209 a.a., ribosomal RNA large subunit methyltransferase E from Vibrio cholerae E7946 ATCC 55056

Subject, 217 a.a., 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE from Rhodanobacter sp000427505 FW510-R12

 Score =  237 bits (605), Expect = 1e-67
 Identities = 117/202 (57%), Positives = 154/202 (76%)

Query: 7   SASSTRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGAAPGGWS 66
           S SS  WL+EHF+D+YV +A+ +G RSRA++K+EE+  +D+LLK G+ VVDLGAAPG WS
Sbjct: 4   SKSSAVWLREHFNDEYVKKAQAEGLRSRAVYKLEELIERDRLLKPGINVVDLGAAPGSWS 63

Query: 67  QFAAKVVGEGGRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPDMVDVVMSDMA 126
           Q     +G+ G+V A D+LPM+SIAGV FLQGDFREE VL+ L  R++   VD+V+ DMA
Sbjct: 64  QLVRNRLGDSGKVFALDILPMQSIAGVDFLQGDFREETVLHELESRLEGLKVDLVLCDMA 123

Query: 127 PNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKAVRDLFKVVK 186
           PNM+G    DQ RAM L ELALD  RQ L P GSF++K+FQG GFDDY++++R  F  V 
Sbjct: 124 PNMSGVALADQIRAMDLAELALDFSRQWLKPGGSFLIKLFQGVGFDDYLRSLRADFTRVT 183

Query: 187 IRKPDSSRSRSREVFIVATGYK 208
           +RKP +SR+RSREV+ +ATG+K
Sbjct: 184 MRKPKASRARSREVYALATGFK 205