Pairwise Alignments

Query, 209 a.a., ribosomal RNA large subunit methyltransferase E from Vibrio cholerae E7946 ATCC 55056

Subject, 224 a.a., '23S rRNA (uridine(2552)-2'-O)-methyltransferase (EC 2.1.1.166)' transl_table=11 from Sphingobium sp. HT1-2

 Score =  150 bits (380), Expect = 1e-41
 Identities = 83/208 (39%), Positives = 122/208 (58%), Gaps = 2/208 (0%)

Query: 2   SKQKHSASSTRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGAA 61
           S +  +A S RWL+ H +D YV++AK++G+RSRA FK+ E+  K   +K    VVDLG A
Sbjct: 13  SAKGRTAQSVRWLERHLNDPYVHKAKQEGWRSRAAFKLIELDEKFHFVKGSRAVVDLGVA 72

Query: 62  PGGWSQFAAKVVGEGGRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPDMVDVV 121
           PGGW+Q   K+  +   V+  DLLP++ I GV+  + DF ++   + L + +  +  D+V
Sbjct: 73  PGGWAQVIRKMAPKAA-VVGIDLLPVDPIPGVTLFEMDFMDDKAPDLLREALGQE-PDLV 130

Query: 122 MSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKAVRDL 181
           +SDMA N  G+   D  R M LVE A D   Q L   G+FV KVF G    + +  ++  
Sbjct: 131 ISDMAANTVGHAQTDHLRTMGLVEAAADFAVQNLRKGGTFVAKVFAGGTDAELLAVLKKH 190

Query: 182 FKVVKIRKPDSSRSRSREVFIVATGYKG 209
           F  +K  KP +SR  S E ++VA G+KG
Sbjct: 191 FTTIKHAKPPASRKGSVEWYVVAQGFKG 218