Pairwise Alignments

Query, 209 a.a., ribosomal RNA large subunit methyltransferase E from Vibrio cholerae E7946 ATCC 55056

Subject, 220 a.a., RlmE family RNA methyltransferase from Paraburkholderia sabiae LMG 24235

 Score =  182 bits (461), Expect = 5e-51
 Identities = 95/220 (43%), Positives = 136/220 (61%), Gaps = 15/220 (6%)

Query: 1   MSKQKHSASSTRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGA 60
           M+K K + S   WL +H +D YV  A+++GYR+RA +K++EI  +DKL++AG  +VDLGA
Sbjct: 1   MAKNKFNTS---WLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRAGQVIVDLGA 57

Query: 61  APGGWSQFAAKVVGEG------------GRVIACDLLPMESIAGVSFLQGDFREEAVLNA 108
           APG WSQ+    +  G            G +IA DLLPME IA V F+QGDFRE++VL  
Sbjct: 58  APGSWSQYVRNKLAHGKNRDSQREGGIDGTIIALDLLPMEPIADVHFIQGDFREDSVLEQ 117

Query: 109 LLDRIQPDMVDVVMSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQG 168
           L + +    VD+V+SDMAPN++G    D  R  ++ +LAL+  +  L P+G+ +VK F G
Sbjct: 118 LEEVVGDRDVDLVISDMAPNLSGVAVADAARIEHVCDLALEFSQNHLKPDGALLVKCFHG 177

Query: 169 EGFDDYVKAVRDLFKVVKIRKPDSSRSRSREVFIVATGYK 208
            G+   V+  +  FK V  RKP +SR +S E FI+    K
Sbjct: 178 SGYSQIVEKFKHQFKTVAARKPKASRDKSSETFILGKHLK 217