Pairwise Alignments

Query, 209 a.a., ribosomal RNA large subunit methyltransferase E from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., Heat shock protein FtsJ/RrmJ @ Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  169 bits (428), Expect = 4e-47
 Identities = 95/208 (45%), Positives = 128/208 (61%), Gaps = 13/208 (6%)

Query: 13  WLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGAAPGGWSQFAAK- 71
           WL +H +D YV  A+K GYR+RA +K++EI     L++ G  VVDLG+ PG WSQ+  + 
Sbjct: 16  WLNQHVNDPYVRLAQKDGYRARAAYKLQEIDETLGLVRPGQAVVDLGSTPGAWSQYLRRR 75

Query: 72  ------VVGE-GGRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPD----MVDV 120
                  VGE  G ++A D+LPME++ GV F+QGDFRE  VL A L+R   D     VD+
Sbjct: 76  LSPNGAAVGELHGTIVALDMLPMEAVEGVHFIQGDFREAEVL-AELERTLVDKGVQQVDL 134

Query: 121 VMSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKAVRD 180
           V+SDMAPN++G    D  R   LVELA+D     L P+G+ VVK+F G  +D  V   R+
Sbjct: 135 VVSDMAPNLSGIGMTDAARISDLVELAVDFAVHHLKPDGALVVKLFHGGAYDPMVALFRE 194

Query: 181 LFKVVKIRKPDSSRSRSREVFIVATGYK 208
            F+ VK  KP +SR +S E F+V  G K
Sbjct: 195 TFRTVKAVKPKASRDKSSETFLVGLGLK 222