Pairwise Alignments

Query, 209 a.a., ribosomal RNA large subunit methyltransferase E from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., 23S rRNA methyltransferase from Magnetospirillum magneticum AMB-1

 Score =  160 bits (406), Expect = 1e-44
 Identities = 89/211 (42%), Positives = 127/211 (60%), Gaps = 6/211 (2%)

Query: 4   QKHSASSTRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGAAPG 63
           ++   SST WL+   +D YV+EAK+ GYRSRA FK+ ++  +  +LK G+ VVDLGAAPG
Sbjct: 32  KRRKLSSTLWLQRQLNDPYVHEAKRLGYRSRAAFKMIQLDERFHILKPGLRVVDLGAAPG 91

Query: 64  GWSQFAAKVVGE-----GGRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPDMV 118
           GW+Q A + VG      GG+V+  D+L  + + G   LQGDF  +   + L + +     
Sbjct: 92  GWTQVAVEKVGALKPKGGGKVVGMDILEWDPLPGAITLQGDFLADDAPDRLKEAL-GGPA 150

Query: 119 DVVMSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKAV 178
           DVV+SDMA    G+ S D  R + LVE+AL    +VL P G+FV KVFQG      +  +
Sbjct: 151 DVVLSDMAAPTTGHPSTDHLRIIGLVEVALHFALEVLTPGGTFVAKVFQGGTEKTLLDQL 210

Query: 179 RDLFKVVKIRKPDSSRSRSREVFIVATGYKG 209
           +  F  V+  KP +SR  S E ++VATG++G
Sbjct: 211 KKNFTTVRHAKPPASRQGSAETYVVATGFRG 241