Pairwise Alignments

Query, 209 a.a., ribosomal RNA large subunit methyltransferase E from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE from Erwinia tracheiphila SCR3

 Score =  297 bits (760), Expect = 1e-85
 Identities = 147/208 (70%), Positives = 170/208 (81%)

Query: 1   MSKQKHSASSTRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGA 60
           M+ +K SASS+RWL+EHF DKYV EA+KKG RSRA FK++EIQ  DKL K GMTVVDLGA
Sbjct: 1   MTGKKRSASSSRWLQEHFSDKYVLEAQKKGLRSRAWFKLDEIQQSDKLFKHGMTVVDLGA 60

Query: 61  APGGWSQFAAKVVGEGGRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPDMVDV 120
           APGGWSQ+    +G  GRVIACD+LPM+ I GV FLQGDFR+E VL AL+ R+  D + V
Sbjct: 61  APGGWSQYVVTQIGNKGRVIACDILPMDPIVGVDFLQGDFRDELVLKALMYRVGYDKIQV 120

Query: 121 VMSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKAVRD 180
           VMSDMAPNM G   VD PR+MYLVELALDMCR VLAP GSF+VKVFQG+GF+DY++ +R 
Sbjct: 121 VMSDMAPNMTGTPEVDIPRSMYLVELALDMCRDVLAPGGSFLVKVFQGDGFEDYLREIRS 180

Query: 181 LFKVVKIRKPDSSRSRSREVFIVATGYK 208
           LF  VKIRKPDSSRSRSREV+IVATG K
Sbjct: 181 LFTKVKIRKPDSSRSRSREVYIVATGRK 208