Pairwise Alignments

Query, 209 a.a., ribosomal RNA large subunit methyltransferase E from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE from Dickeya dadantii 3937

 Score =  296 bits (759), Expect = 1e-85
 Identities = 144/208 (69%), Positives = 170/208 (81%)

Query: 1   MSKQKHSASSTRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGA 60
           M+ +K SASS+RWL+EHF DKYV +A+KKG RSRA FK++EIQ  D+L K GMTVVDLGA
Sbjct: 1   MANKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQTDRLFKPGMTVVDLGA 60

Query: 61  APGGWSQFAAKVVGEGGRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPDMVDV 120
           APGGWSQ+    +G  GR+IACDLLPM+ I GV FLQGDFR+E VL  LL+R+  + V V
Sbjct: 61  APGGWSQYVVSQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVLKTLLERVGDEKVQV 120

Query: 121 VMSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKAVRD 180
           VMSDMAPNM+G   VD PRAMYLVELALDMCR +LAP GSFVVKVFQG GFD+Y++ +R 
Sbjct: 121 VMSDMAPNMSGTPEVDIPRAMYLVELALDMCRDILAPGGSFVVKVFQGVGFDEYLREIRS 180

Query: 181 LFKVVKIRKPDSSRSRSREVFIVATGYK 208
           LF  VKIRKPD+SR+RSREV+IVATG K
Sbjct: 181 LFTTVKIRKPDASRARSREVYIVATGRK 208