Pairwise Alignments

Query, 350 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., porin from Dickeya dianthicola ME23

 Score = 68.6 bits (166), Expect = 2e-16
 Identities = 87/369 (23%), Positives = 135/369 (36%), Gaps = 74/369 (20%)

Query: 10  MNKTLIALAVSAAAVATGAYADGINQSGDKAGSTVYSAKGTSLEVGGRAEARLSLKDGKA 69
           M + ++A+ + A   A  A A           + VY+  G  L++ G+  A     D   
Sbjct: 1   MKRNILAVVIPALLAAGAANA-----------AEVYNKDGNKLDLTGKVHAGYYFGDSTK 49

Query: 70  Q-----DNSRVRLNFLGKAEINDSLYGVGFYEGEF-TTNDQGKNA-----SNNSLDNRYT 118
                 D + VRL F G+ +I   L G G +E  F  +N +  N+     + N    RY 
Sbjct: 50  SFEGRGDQTYVRLGFKGETQITKDLTGYGRFEYHFDASNPEDSNSLPIGTNGNGSKTRYA 109

Query: 119 YAGIG-GTYGEVTYGKNDGALGVITDFTDIMSYHGNTAAEKIAVADRVDNMLAYKGQ--F 175
           YAG+    +G   YG+N G       +TD++   G   +   ++  R   +  Y+ +  F
Sbjct: 110 YAGLKFANFGAFDYGRNKGIAYDGISYTDVLPEWGGDQSYTDSITGRTSGVATYRNKNFF 169

Query: 176 G-----DLGVKASYRFADRNAVDAMGNVVTETNAAKYSDNGEDGYSLSAIYTFGDTGFNV 230
           G     D GV+   +  D             T   K +    DG+ +S+ YT    G  V
Sbjct: 170 GLVDGWDFGVQYQAKHED------------STQLRKQTG---DGWGISSSYT-SPIGVGV 213

Query: 231 GAGYADQD-----------------------DQNEYMLAASY-RMENLYFAGLFTDGELA 266
            A Y   D                       D N   LA +Y    NL + G  +   L 
Sbjct: 214 IASYEAADRTSTQVADNRGKKAEAWATGLKYDANSIYLATTYGEYHNLSYLGRTSTFALD 273

Query: 267 KDVDYTG---YELAAGYKLGQAAFTATYNNAETAKETSADNF-AIDATYYFKPNFRSYIS 322
           K   +     Y    G     A  +A  +N           + +I +TY F  N  + + 
Sbjct: 274 KTKVFEAVAQYHFDFGLTPSLAYVSAKADNDTAGTSGYITKYVSIGSTYNFNKNLAANVE 333

Query: 323 YQFNLLDSD 331
           Y  NL+DSD
Sbjct: 334 YLVNLIDSD 342