Pairwise Alignments

Query, 350 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., porin from Dickeya dianthicola 67-19

 Score = 86.7 bits (213), Expect = 9e-22
 Identities = 95/381 (24%), Positives = 158/381 (41%), Gaps = 54/381 (14%)

Query: 10  MNKTLIALAVSAAAVATGAYADGINQSGDKAGSTVYSAKGTSLEVGGRAEAR--LSLKDG 67
           M + ++A+ + A  +ATGA             + +Y+  G  L + G+ +     S   G
Sbjct: 1   MKRNILAVVIPAL-LATGA----------ANAAEIYNKDGNKLNLNGKIDGLHYFSKDTG 49

Query: 68  KAQDNSRVRLNFLGKAEINDSLYGVGFYEGEFTT-NDQGKNASNNSLDNRYTYAGIG-GT 125
            + D +  RL FLG+ +IN+ L G G  E +F   N +  N +N     RY YAG+    
Sbjct: 50  NSGDKTYARLGFLGETKINNDLTGYGRLEYQFNAANAEDTNGANGK--TRYAYAGLKFAD 107

Query: 126 YGEVTYGKNDGALGVITDFTDIMSYHGNTAAEKIAVADRVDNMLAYKGQ--FG---DLGV 180
           +G   YG+N         +TD++   G  +A   +   R   +  Y+ +  FG    L  
Sbjct: 108 FGSFDYGRNRNVSYDGISYTDVLPEWGGDSAYTNSFTGRSSGVANYRNKDFFGLVDGLNF 167

Query: 181 KASYRFADRNAVDAMGNV-------VTETNAAKYSDNGEDGYSLSAIYTFGDTGFNVGAG 233
             SY+ A  ++ +   N+        + T+       G  G+   A    G +  N G G
Sbjct: 168 GLSYQSAHTDSNNVRNNLGGGYALSTSYTSPIGVGIIGSYGHVNRANKANGSSVTNDGRG 227

Query: 234 YADQD--------DQNEYMLAASY-RMENLYFAGLFTDGELAKDVDYTGYELAAGYK-LG 283
             D D        D N   LAA+Y    NL + G  +    +     T ++    ++ + 
Sbjct: 228 -TDADMWATGLKYDANSIYLAATYGEYRNLSYVGFSSFNTGSTRAGGTAFDKTQVFEAVA 286

Query: 284 QAAF------TATYNNAETAKETSADN--------FAIDATYYFKPNFRSYISYQFNLLD 329
           Q  F      +  Y +A+   +T+A           +   TY F  NF +Y  Y  NLL 
Sbjct: 287 QYVFDFGLKPSIAYVSAKAKDDTAATTQNDYIVKYVSYALTYSFNKNFSTYTEYDMNLLS 346

Query: 330 SDKVGKVASEDELAIGLRYDF 350
           S+   K+A++D +A+G+ Y F
Sbjct: 347 SNNAYKMATDDRVAVGVVYQF 367