Pairwise Alignments

Query, 487 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) from Variovorax sp. SCN45

 Score = 75.9 bits (185), Expect = 3e-18
 Identities = 97/436 (22%), Positives = 181/436 (41%), Gaps = 26/436 (5%)

Query: 12  IPVWLLSISGFLIASPIYAQTPLTAATTKLPQGARYSLLIEDVALQQNTLELNTHLYYPP 71
           I + +L+ +G L      +Q     A  K+P+ A   L+ +    +   L   T +   P
Sbjct: 20  ISLAMLAPAGALAQQAFPSQVDAALARAKVPREAVTMLVADADGSRPPRLAWRTQVPVNP 79

Query: 72  ASTQKILTALAAKLELGDKFRFHTDLMRSGQ--------DWIIRFSGDPTLTTADLTTLL 123
           AS  K++T  AA   LG  + + T +   G         +  I+  GDP L    +  LL
Sbjct: 80  ASIMKLVTTYAALDLLGPAYNWTTPVYTDGTVSNGVLNGNLYIKGQGDPKLVLERMWLLL 139

Query: 124 KAMKAQSGGRIEGDLWLDNSVFSGYERAVGWPWDILGVC-YSAPASAINLDANCIQASIY 182
           + ++      + GD+ +D S F          +D   +  Y+A   A+ ++   +  S  
Sbjct: 140 RHVQGLGITTVNGDIVIDRSAFENTVEGDPAAFDGEPLRPYNASPDALLVNFKSVNMSFA 199

Query: 183 TEPQGKTRVYVPEHYPVHVQSQAISVT----QSEQESLLCDLELTATPENHYTLDGCLAL 238
            +  G+   +   +Y   + S A+  T      E       L       N    +G    
Sbjct: 200 PDRAGQ---FARVNYEPPLASVAMPATVPLVPGECGDWRTALRADFADVNRIRFNGGFPA 256

Query: 239 RDKPLPLKFAVQDTGIYTQRVVYRLLSQLNIELKGKIKVGK--ANTKQAQKIASHHSQPL 296
                    A  D   Y+ R +  + +++   + G+++ G+  A  K A +     S PL
Sbjct: 257 GCGERSWAVAYADPRTYSLRAIGGMWAEMGGRVGGQMREGRVPAGLKPAFEF---ESPPL 313

Query: 297 PVLLKTMLQESDNLIADTLTKALGHRFYSQPGSFTNGTQAIKQIFYSRTGISLEDTQLAD 356
             +++ + + S+N++A  L   +G    ++ G+F     A+ Q +  R G         +
Sbjct: 314 AEVVRDINKYSNNVMAQQLFLTIGLTQKNR-GTFEASRTALGQWWRDRIGTGEAPPVFEN 372

Query: 357 GSGLSRNNRMRPQVMLETLRYLYQHEAELGLIAMLPSAGESGTLQYRRSMRAPQISGQIK 416
           GSGLSR+ R+    + + L+  ++      L++ LP+ G  GTL+ +R++R+    G   
Sbjct: 373 GSGLSRDERISAAALGKMLQVAWRSPVMPELVSSLPAMGVDGTLK-KRTLRS---GGSAH 428

Query: 417 AKSGSLYGTYNMAGFV 432
            K+G+L     +AGFV
Sbjct: 429 LKTGTLRDASGVAGFV 444