Pairwise Alignments

Query, 487 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 73.2 bits (178), Expect = 2e-17
 Identities = 91/401 (22%), Positives = 166/401 (41%), Gaps = 36/401 (8%)

Query: 50  LIEDVALQQNTLELNTHLYYPPASTQKILTALAAKLELGDKFRFHTDLMRSGQDWIIRFS 109
           ++ D A  +    LN   Y+ PAS  K+ T  AA   LGD+     D + SG   I   +
Sbjct: 38  MLVDPAKDKVLYALNEDKYFTPASNTKMFTFYAAYKVLGDQVNA-LDYVESGDSLIFWGT 96

Query: 110 GDPTLTTADLT--TLLKAMKAQSGGRIEGDLWLDNSVFSGYERAVGWPWDILGVCYSAPA 167
           GDP+L   D    T+L  +     G  +  L++ ++       A GW W+     Y    
Sbjct: 97  GDPSLMHPDFEDRTVLDML-----GNTDKRLYMADNFDEVQAYASGWSWNWFHYYYGPER 151

Query: 168 SAINLDANCIQASIYTEPQGKTRVYVPEHYPVHVQSQAISVTQSEQESLLCDLELTATPE 227
           SA+ +  N ++   +T+           H+            Q +++  L   E      
Sbjct: 152 SAMPVYGNIVR---FTKTAEADNFSFSPHF---------LAPQIKEDHSLPAREYAIVRS 199

Query: 228 NHYTLDGCLALRDKPLPLKFAVQDTGIYTQRVVYRLLSQLNIELKGKIKVGKANTKQAQK 287
            H        + ++   L F      + + ++   +L+    +    +   K   +  QK
Sbjct: 200 QHINDFRYHVVGEE---LSFETDKPFVTSAQLTKEMLADTLGKDIMMVDYDKVKNRPHQK 256

Query: 288 IASHHSQPLPVLLKTMLQESDNLIADTLTKALGHRFYSQPGSFTNGTQAIKQIFYSRTGI 347
           +    +  L    K ML+ SDN +A+ L   +  +  S   +     Q +++ + S    
Sbjct: 257 LKGIATDSL---YKQMLKISDNFLAEQLMVLVADQL-SDSLNVRGAIQYLEENYLS---- 308

Query: 348 SLEDT-QLADGSGLSRNNRMRPQVMLETLRYLYQHEAELGLIAMLPSAGESGTLQYRRSM 406
            L D  Q  DGSGLS  N+  P+ +++ L+ + +   E  + A  PS G SGT+  R   
Sbjct: 309 DLPDAPQWVDGSGLSSQNKFTPRSIIKLLQKIKEEVPEEKIFAYFPSGGASGTI--RSWY 366

Query: 407 RAPQISGQIKAKSGSLYGTYNMAGFVMDENQRPKTLFVQFV 447
           ++      + AK+G+L G + ++G+++ ++   KTL   F+
Sbjct: 367 KSDDEHPYVYAKTGTLSGVHCLSGYLLTKS--GKTLHFSFM 405