Pairwise Alignments

Query, 433 a.a., peptidase M23 from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., murein DD-endopeptidase MepM from Dickeya dianthicola ME23

 Score =  208 bits (529), Expect = 3e-58
 Identities = 116/347 (33%), Positives = 188/347 (54%), Gaps = 8/347 (2%)

Query: 78  YQVANGESAALLFQRAGLSSRVLYELTSSNSDINNQLSKLMPKDELKFGFDKDNQLVQLK 137
           Y V+ G++ + +  + G+    +  L   N+ + N    L    +L +  D D  L  L 
Sbjct: 129 YVVSTGDTLSSILTQYGIDMSDIAALADRNAALRN----LKIGQQLTWTLDSDGALQTLT 184

Query: 138 RTISPYETFVVTRSDSGFTSEFDKKEVTFQLNYAEAKITSNFWNAGVTAGLSANQIIELA 197
              S  ET   TR+   F  E +  E  +Q      ++  +F ++   AGL+++++ E+ 
Sbjct: 185 WQASRRETRTYTRNGDAFREEIENVEGDWQNKVLIGRLDGSFASSAQAAGLTSSEVREVI 244

Query: 198 NMFGWDIDFALDIREGDQFKLLYQEKIVEGSVIGRGNIIAATFINQGSTFTAILDDNTGN 257
               W +DF   +R+ D F +L   +I++G    +  +        G  + A   ++ G 
Sbjct: 245 RALQWQLDFR-KLRKDDSFAVLISREILDGRS-EQSELQGVRLRTGGKNYYAFRAED-GK 301

Query: 258 YYDQNGRAMKKAFLRSP-LDFRRVSSNFNPRRLHPVTGQIKAHRGTDYVAPVGTPIWAAG 316
           +YD+    + + FLR P +   ++SSNFNPRRL+PVTG+I  HRG D+  PVGTP+ A G
Sbjct: 302 FYDREASGLTRGFLRFPTMKQFKISSNFNPRRLNPVTGRIAPHRGVDFSMPVGTPVLAVG 361

Query: 317 DGVVEKSSYNQFNGNYVYIRHSNTYITKYLHLQRRLVKTGERVKQGQTIGTLGGTGRVTG 376
           DG V  +  +   GN+V +RH   Y T+Y+H+ R LVK G+R+K+G  IG  G TGR TG
Sbjct: 362 DGEVVVAERDSEAGNFVAVRHGRQYTTRYMHMNRLLVKPGQRIKRGDRIGLSGNTGRSTG 421

Query: 377 PHLHYEFLVNGIHKNPRTVELPQAQSLTGKAKETFIANAKQRMEKLE 423
           PHLHYE  VN    NP T +LP+++ L GK +  ++A+ ++ + +L+
Sbjct: 422 PHLHYELWVNQQAVNPLTAKLPRSEGLIGKDRRDYLAHVREVLPQLQ 468