Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1049 a.a., Nickel and cobalt resistance protein CnrA from Xanthobacter sp. DMC5

 Score =  303 bits (775), Expect = 6e-86
 Identities = 266/1053 (25%), Positives = 469/1053 (44%), Gaps = 73/1053 (6%)

Query: 12   TRTMLTLLVFILV--AGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERLIVRPLE 69
            T   LTL   +L+  AG  +Y  + +   P  TI ++ V  +  G + S+ +  +  P+E
Sbjct: 32   THRALTLFAILLLGAAGAYSYFNLGRAEDPSFTIKVMVVQAAWPGATASEMQAQVADPIE 91

Query: 70   QEMRSIEGVKEMTATASEGHASVVLEFNVGVDLAKAMAD----VRDAVDLAKPKLPADSD 125
            ++++S+  +  + + +  G  S V  F      AK + D    VR  V   +  LPA   
Sbjct: 92   KKLQSLPHLDRVESYSRPG-VSFVQVFLRDNTPAKEVKDLWYQVRKKVSDVRGDLPAGVI 150

Query: 126  EPTVNEVTLAAEQPVLSVVLYGTVPERTTVLIARQLRDKLESFRQILSVDIAGDREEIVE 185
             P  ++        +  +   G  P       A  +R +L     +  VD+ G+R E + 
Sbjct: 151  GPGFDDEYGDVYSALYILSGQGAAPAELKRQ-AELIRQRLLRVPNVEKVDLIGERPEKIY 209

Query: 186  IIVDPLLMESYGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDVLELPI 245
            I      + + G+    +++ +A  N VVA G VDT   R +++V   F  ++ + E+P+
Sbjct: 210  IEFSHARLANLGITPQQVFDSVARQNAVVAGGAVDTRSDRINLRVTGAFTGVEAIAEVPV 269

Query: 246  KVEGKQVITFGDVATVRKSFRDPESFA-RLDGKPAIVLDIKKRSGENIIETVELVKAVLG 304
             V G  ++  GD+ATV++ + DP +F  R  G PA+ + +    G NI+   E +K  + 
Sbjct: 270  AVNGA-LLRLGDIATVKRGYEDPPAFLMRQHGLPALGIGVSMAQGANILTLGEGLKTAMA 328

Query: 305  EAQARDDWPNNLLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAILGVRTSLLVGV 364
            EA A  + P+ + V  + D+   V   + +     L A+++V+VV    LG RT ++V +
Sbjct: 329  EATA--ELPHGIDVTQVADQPHIVGESVGEFLKTFLEALVIVLVVSFLSLGFRTGIVVAL 386

Query: 365  SIPGSFLTGLLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMHRSEAY 424
            S+P       L++   G+ ++ + L ALI+A+G+LVD AI+  E    +M+EG  R  A 
Sbjct: 387  SVPLVLAIVFLIMFSAGMDLHRITLGALIIALGLLVDDAIIAIEMMVVKMEEGWDRMSAA 446

Query: 425  RDAAKRMAWPITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLVMALLFVPV 484
              A    A+P+   T  T A F P+ F    +GE+   +   +   L AS  +A++F P 
Sbjct: 447  TFAWTSTAFPMLTGTLVTAAGFLPVGFAKSSSGEYAGGIFWVVGIALIASWFVAVIFTPY 506

Query: 485  LGSLFGRPQKVTQANQARMVALHNGDFSQATGITKAYYSTLAIAIRHPIKILCGALLMSA 544
            LG++     K    +      +H+G       + +    TL   +RH   ++   ++M A
Sbjct: 507  LGTVLLPDMKKAGGHH----EMHDG------RLYRMLRGTLEFCLRHRFMVIGTTVVMFA 556

Query: 545  AIAFAYGKAGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIEQVMLGHDEFESVY 604
                A+G   +  +FFP    P   +++R     S+   +      E  ++G D   +  
Sbjct: 557  GSVVAFG--FVQQQFFPTSTRPELFLEIRLPEGTSITVTEATAKKAE-ALVGEDPDVATS 613

Query: 605  TRTGG---------------DDEIGVVQITPVDWQYRRSVKAIIE-ELEQVTDTFPGVEI 648
            T   G               +     + I   D   R  +KA ++ EL +   +   V +
Sbjct: 614  TTYVGRGAPRFWLGLNPVLPNPNFAQIVIVAKDVAARERLKARLDAELAEGALSEARVRV 673

Query: 649  E-YKFPDAGPPVEHDLEIEISARVADDLDKAAQQVRLWAEANPALTNLSDNGSKPGIDWK 707
            + + F   GPPV   ++  +       +   A++VRL   ++  + +   N  +      
Sbjct: 674  DRFVF---GPPVGFPVQFRVVGPDPIAVRDIAEKVRLVMASDTDMIDPHLNWGEQVKSIT 730

Query: 708  IDIRRDDASRFAADATLVGNTVQFVTNGLKIGDYLPDDSDEEVDILVR-YPSEYRDIGRF 766
            + + +D A         +  T+Q +  G  I      + +  +D++ R  P E  D+   
Sbjct: 731  LTVDQDRARALGTSPRDIAETLQTLLQGYAITQL--REGNLLIDVMARAVPEERVDLEHL 788

Query: 767  DQLRVKTAQGL-VPLTNFAQIIPEQKQDTIHRVDGRRVISVMADLKEGYN----LALELP 821
              L V T  GL VPL   A+I    ++  + R D   V++V  D+++G          LP
Sbjct: 789  AALTVTTRNGLAVPLGQVARIGYAHEEPILWRRDRDLVLTVRGDVRDGVQPPDVTTRLLP 848

Query: 822  AIEQALRELNLPSSVEFRIRGQNEEQEHSAVFLEKAFMVALAAMAIILITQFNSFYQAFL 881
             + Q   E  LP        G  EE   +   L   F V +  M  +L+ Q  SF +  L
Sbjct: 849  KLAQLKAE--LPPGYRIETGGSIEESAKANASLAAVFPVMIIVMLTLLMIQLQSFSRLAL 906

Query: 882  ILTAVIFSTVGVFAGLLIFQKPFGIIMSGIGVIALAGIVVNNNIVLIDTYNQLLKRGLSR 941
            +L       +G  A LLI  +PFG + + +G+IALAG+++ N ++L+D  +  ++ G + 
Sbjct: 907  VLATAPLGLIGAAAALLIAHRPFGFV-ALLGLIALAGMIMRNTVILVDQIDHDIRDGATP 965

Query: 942  EEAILRTGVQRLRPVLLTTVTTILGLLPMVLEMNIDIINQKIEFGAPSTQWWSQLATAVA 1001
              AI+   ++R RPV+LT +  +LG++P+                   + +W  +A  + 
Sbjct: 966  HRAIVEATLRRARPVVLTALAAVLGMIPLA-----------------ESVFWGPMAVTIM 1008

Query: 1002 GGLAFATVLTLVLTPCLLMLGRRRKGVSEDEAP 1034
            GGL  ATVLTL++ P L     R K   E+ AP
Sbjct: 1009 GGLLVATVLTLLVVPALYATWFRVKVTEEETAP 1041