Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  296 bits (759), Expect = 4e-84
 Identities = 256/1040 (24%), Positives = 480/1040 (46%), Gaps = 57/1040 (5%)

Query: 4    LIDAALSRTRTMLTLLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERL 63
            L D ++ R    L L + + V GV ++  +     PD+  P++ VS  +QG S +  E  
Sbjct: 3    LSDVSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIESQ 62

Query: 64   IVRPLEQEMRSIEGVKEMTATASEGHASVVLEFNVGVDLAKAMADVRDAVDLAKPKLPAD 123
            I   LE ++  I G+ E+T+ +  G + + + F +G DL   ++D+RDAV  A+  LP +
Sbjct: 63   ITSVLEDQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLPEE 122

Query: 124  SDEPTVNEVTLAAEQPVLSVVLYGTVPERT--TVLIARQLRDKLESFRQILSVDIAGDRE 181
            +D+P V +    + Q  + + L  +  +RT  T  I R L D+      + SVD++G   
Sbjct: 123  ADDPQVFK-NNGSGQASVYINLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGGLY 181

Query: 182  EIVEIIVDPLLMESYGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDVL 241
            +++ + + P LM   G+  SDI + +   N     G V       SV+    ++S +D  
Sbjct: 182  KVMYVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAEDFE 241

Query: 242  ELPIK-VEGKQVITFGDVATVRKSFRDPESFARLDGKPAIVLDIKKRSGENIIETVELVK 300
             L +K       I   DVA V     +  S  + DG   + + I  +S  N +E  + V 
Sbjct: 242  YLVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKRVH 301

Query: 301  AVLGEAQARDDWPNNLLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAILG-VRTS 359
              + + Q     P    +   +D +  ++  ++++ + +     LV++V+   +G +R +
Sbjct: 302  EEVDKVQ--QFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRAT 359

Query: 360  LLVGVSIPGSFLTGLLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMH 419
            L+  V++P S ++  +    FG ++N++ L ALI+++G++VD AIVV E     ++ G  
Sbjct: 360  LIPAVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGEK 419

Query: 420  RSEAYRDAAKRMAWPITASTATTLAAFAPLLFWPDVTG-EFMKYLPLTLMATLTASLVMA 478
               A     + + + + A+T   +  F P+ F   + G  F ++  L  MA + +SL+ A
Sbjct: 420  PLLAAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLI-A 478

Query: 479  LLFVPVLGSLFGRPQKVTQANQARMVALHNGDFSQA-----TGITKAYYSTLAIAIRHPI 533
            L   PVLGS      K+ +AN      +  G F+Q        +   Y   ++ AIR   
Sbjct: 479  LTLTPVLGS------KLLKAN------VKPGRFNQLIDRLFARLESGYRQVVSRAIRWR- 525

Query: 534  KILCGALLMSAAIAFAYGKAGL-GAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIEQ 592
                  ++++A I  +YG   L  A+  P  D       VR     S N     M  +EQ
Sbjct: 526  --WAAPVVIAACIGGSYGLMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQ 583

Query: 593  ---VMLGHDEFESVYTRT---GGD--DEIGVVQITPVDWQYRR-SVKAIIEELEQVTDTF 643
                +LG    +S   ++   GG+  D+ G V +   DW  R  + +  + ++ +     
Sbjct: 584  RLMPLLGQGFLKSFSIQSPAFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKALAGI 643

Query: 644  PGVEIEYKFPDAGPPVEHDLEIEISARVADDLDKAAQQVRLWAEANPALTNLSDNGSKPG 703
            P V +    P         ++  +      +L   A+++   AE +P +T    + S+  
Sbjct: 644  PDVRVFPFMPGFRGGSNEPVQFVLGGSDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKT 703

Query: 704  IDWKIDIRRDDASRFAADATLVGNTVQFVTNGLKIGDYLPDDSDEEVDILVR-YPSEYRD 762
             +  + I +  A+        + +T++ +  G K+  ++  +  EE D+ +R   + + +
Sbjct: 704  PELVVTIDKQRAAELGISVKSISDTLEVMLGGKKVTTFV--ERGEEYDVYLRGDENSFNN 761

Query: 763  IGRFDQLRVKTAQG-LVPLTNFAQIIPEQKQDTIHRVDGRRVISVMADLKEGYNLALELP 821
                 Q+ ++TA G LV L    +I        +   + ++ +++ A+L+ GY L   L 
Sbjct: 762  AADLSQIYMRTATGELVTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQALD 821

Query: 822  AIEQALRELNLPSSVEFRIRGQNEEQEHSAVFLEKAFMVALAAMAIILITQFNSFYQAFL 881
             ++Q  +E+ LP+ +     G++++ + +   +   F +AL    ++L  QF SF    +
Sbjct: 822  FLDQKAQEI-LPNDISVSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLV 880

Query: 882  ILTAVIFSTVGVFAGLLIFQKPFGIIMSGIGVIALAGIVVNNNIVLIDTYNQLLKRGLSR 941
            ++  V     G F GL +  +    I S IG+I L G+V  N I++++  NQL  RG+  
Sbjct: 881  VMLTVPMGVFGGFLGLFVMGQGMN-IYSQIGMIMLIGMVTKNGILIVEFANQLRDRGVEF 939

Query: 942  EEAILRTGVQRLRPVLLTTVTTILGLLPMVLEMNIDIINQKIEFGAPSTQWWSQLATAVA 1001
            E+AI+    +RLRP+L+T  TT+ G +P+++         +I  G           T + 
Sbjct: 940  EKAIIDASARRLRPILMTAFTTLAGSIPLIVSTGAG-YESRIAVG-----------TVIF 987

Query: 1002 GGLAFATVLTLVLTPCLLML 1021
             G+ FAT++TL++ P +  L
Sbjct: 988  FGMGFATLVTLLVIPAMYRL 1007