Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1133 a.a., Cation/multidrug efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  556 bits (1433), Expect = e-162
 Identities = 363/1116 (32%), Positives = 595/1116 (53%), Gaps = 103/1116 (9%)

Query: 2    FTLIDAALSRTRTMLTLLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAE 61
            F L   A++   +++ L + I   G+  Y T+PKES P++ IP +YV  S+ G SP D E
Sbjct: 14   FGLSSLAVNNKTSVIILSLIITFMGLYAYRTMPKESFPEIVIPTVYVGTSYPGNSPVDME 73

Query: 62   RLIVRPLEQEMRSIEGVKEMTATASEGHASVVLEFNVGVDLAKAMADVRDAVDLAKPKLP 121
             LI RP+E+E++S++ VK + +T+ + ++++++EFN GVD+++A+ D +DAVD +K +LP
Sbjct: 74   NLITRPIEKELKSLKDVKTIESTSIQDYSTIIIEFNPGVDISRALQDTKDAVDKSKSELP 133

Query: 122  ADSDE-PTVNEVTLAAEQPVLSVVLYGTVPERTTVLIARQLRDKLESFRQILSVDIAGDR 180
             D D+ P + E+  + E P++ V L G   +         L D++E+  +I S D+ G  
Sbjct: 134  TDLDQDPNIFELDFS-EMPIMFVNLSGNYSQEELKEFGEYLEDEIEALPEISSADLTGTI 192

Query: 181  EEIVEIIVDPLLMESYGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDV 240
            E  +++  D   ME+  +   DI + I+  N  ++ G + +G  R ++++   FE  +++
Sbjct: 193  EREIQVNADLFKMEAMEVSFGDIADAISSENVTISGGNILSGDFRRALRITGEFEDPEEL 252

Query: 241  LELPIKVEGKQVITFGDVATVRKSFRDPESFARLDGKPAIVLDIKKRSGENIIETVELVK 300
             E+ +K EG  +I   DVA V+ ++++ ES+AR    P + +++ KR GEN++   + +K
Sbjct: 253  NEIIVKSEGGNIIYLKDVAEVKDTYKERESYARASKLPVVTVNVIKRGGENLLAASDKIK 312

Query: 301  AVLGEAQARDDWPNNLLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAILGVRTSL 360
             +L EA+A + +P++L V    D+S+  + M+ +L+N+I+S IILV++V++  +G R +L
Sbjct: 313  EILDEAEA-NHFPSDLKVSITNDQSKVTRSMVANLENSIISGIILVIIVLMFFMGFRNAL 371

Query: 361  LVGVSIPGSFLTGLLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMHR 420
             VG++IP S     ++L  FG+T+N++VLF++I+A+GMLVD  IVV E   R MQEG   
Sbjct: 372  FVGIAIPLSMFISFMILNAFGVTLNMMVLFSMILALGMLVDNGIVVVENVYRLMQEGKTP 431

Query: 421  SEAYRDAAKRMAWPITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLVMALL 480
              A ++    +AWPI  STATT+AAF PL FW D+ GEFMKYLP+TL+  L++SL + L+
Sbjct: 432  IRAAKEGVGEVAWPIITSTATTVAAFIPLAFWQDIMGEFMKYLPITLIIVLSSSLFVGLV 491

Query: 481  FVPVLGSLFGRPQKVTQANQARMVALHNGDFSQATGITK-AYYSTLA-IAIRHPIKILCG 538
              PV+ ++F + Q + +    +   +  G       I   A   T+A IA+   I  L  
Sbjct: 492  INPVVTAMFMKIQDLDKVKPKKRSFIIAGTLLTIAAICYIAQVFTMANIALIAAIITLIN 551

Query: 539  ALLMSAAIA-----------------------------FAYGKAGL-------------G 556
            A+ M  AI                              F +G  G+              
Sbjct: 552  AVFMKRAIRWFQQVFLVWLEEKYEGLLSFALRGKKPYLFFFGMFGVLVFSLVLLMVRSPK 611

Query: 557  AEFFPEVDPPFFSV--------KVRSYGDLSLNEKDRIMSDIEQVMLGHDEF-ESVYTRT 607
             EFFP  DP + ++         + +  + S   +D +M  IE      + F   V   T
Sbjct: 612  VEFFPSSDPNYVNIFIEYPIGTDIEATNEFSKKVEDEVMELIEPHRDIVEAFIAQVGEGT 671

Query: 608  GGDDEIGVVQITP---------VDWQYR--RSVKAIIEELEQVTDTFPGVEIEYKFPDAG 656
                E   + +TP         V++QYR  ++   I+EEL +    +PGV+I       G
Sbjct: 672  SDPSEGPSMGVTPHKAMLTVSFVEYQYRNGKNTTKIMEELREAMAKYPGVQITVDKEQNG 731

Query: 657  PPVEHDLEIEISARVADDLDKAAQQVRLWAE-AN-PALTNLSDNGSKPGIDWKIDIRRDD 714
            PPV   + IE+S    + L    + +R + + AN   +  L  +      +  ++I R+ 
Sbjct: 732  PPVGKPINIEVSGEDYEKLVAEVEDIREFIKGANIGGIEELKMDLQTGKPELIVNIDREK 791

Query: 715  ASRFAADATLVGNTVQFVTNGLKIGDYLPDDSDEEVDILVRYPSEYRDIGRFDQLRVKTA 774
            A RF    + + N ++    GL++  Y   + +++  I +R   +YR     D L  K  
Sbjct: 792  ARRFGLSTSTIANELRTAIFGLEVSKY--KEGEDDYPIQLRLAEKYRY--NVDALVNKKI 847

Query: 775  QGL--------VPLTNFAQIIPEQKQDTIHRVDGRRVISVMADLKEGYNLALELPAIEQA 826
              +        +P+T+ A         ++ R D  +VI++ +++ EG+N       I   
Sbjct: 848  YFMDKFGNKRHIPITSVANFEYSSTYGSVKRKDLDKVITIYSNVNEGFNPTEINNRIRSR 907

Query: 827  LRELNLPSSVEFRIRGQNEEQEHSAVFLEKAFMVALAAMAIILITQFNSFYQAFLILTAV 886
            L +  LP  ++ +  G+ EEQ  S  FL +A M+A+AA+ +I++ QFNS    F+I+ +V
Sbjct: 908  LEDYELPDGMDIKFTGEQEEQAKSMEFLMRAMMIAVAAIFLIIVAQFNSLMTPFIIMCSV 967

Query: 887  IFSTVGVFAGLLIFQKPFGIIMSGIGVIALAGIVVNNNIVLIDTYNQLLK------RGLS 940
            I ST+GVF GL  F   F +IM+GIG+I+LAG+VVNN IVLID Y  L++      RGL 
Sbjct: 968  ILSTIGVFIGLATFNMDFVVIMTGIGIISLAGVVVNNAIVLID-YTNLVRQRKRSDRGLG 1026

Query: 941  REE---------AILRTGVQRLRPVLLTTVTTILGLLPMVLEMNIDIINQKIEF------ 985
             +E         +I+  G  RLRPVLLT +TTILGL+PM + MNID  +   +F      
Sbjct: 1027 EDEHLTYDDLVASIVEGGKTRLRPVLLTAITTILGLIPMAIGMNIDFFSLLSDFDPQFYV 1086

Query: 986  GAPSTQWWSQLATAVAGGLAFATVLTLVLTPCLLML 1021
            G  +  +W  +A  V  GL FAT LTLV+ P + +L
Sbjct: 1087 GGDNADFWGPMAWTVIFGLTFATFLTLVIVPVMYLL 1122