Pairwise Alignments
Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056
Subject, 1033 a.a., Cation/multidrug efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526
Score = 306 bits (784), Expect = 5e-87
Identities = 273/1032 (26%), Positives = 495/1032 (47%), Gaps = 52/1032 (5%)
Query: 18 LLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERLIVRPLEQEMRSIEG 77
L++ ++ G+ T TI KE P + + VSV + G +P + E+ I+ P+E+ +R I+G
Sbjct: 27 LMLLLVGGGIYTMFTIQKEVFPQFQLDFVNVSVVYPGAAPEEVEQGILMPVEEAIRGIQG 86
Query: 78 VKEMTATASEGHASVVLEFNVGVDLAKAMADVRDAVDLAKPKLPADSDEPTVNEVTLAAE 137
+KE+T+TA+EG A + +E G + KA D+ AV+ + P D +EP V V +
Sbjct: 87 IKEITSTANEGSAQISIELVAGTNRMKAFQDIDQAVNRIRT-FPDDIEEPEV--VLQDRQ 143
Query: 138 QPVLSVVLYGTVPERTTVLIARQLRDKLESFRQI--LSVDIAGDREEIVEIIVDPLLMES 195
+ V+ + LYG V T +A +LR++L S +I +S+D D E +EI L
Sbjct: 144 RDVMQLSLYGNVDIWTLRKLAERLRNRLLSQPEITQVSLDNVPDYETRIEIPRHNL--RK 201
Query: 196 YGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDVLELPI--KVEGKQVI 253
Y L + NL+ ++R V AG ++T G +++ + ++ ++ I G QV
Sbjct: 202 YQLTLGQVANLVDQSSRDVPAGAIETNSGEILLRMKERKQWAREFGDINIASSPSGAQV- 260
Query: 254 TFGDVATVRKSFRDPESFARLDGKPAIVLDIKKRSGENIIETVELVKAVLGEAQARDDWP 313
D+AT+ F + + + PA+ ++I + ++ ++ ELV +L + Q P
Sbjct: 261 KLRDIATITDGFEETGFHGQFNQTPAVSMEIFRVGDQSPLDIEELVYELLDDFQL----P 316
Query: 314 NNLLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAILGVRTSLLVGVSIPGSFLTG 373
+ + + +ED + L+ L N L AI++V+V++ L R + V + + SF+ G
Sbjct: 317 PGVAYRIDSNRAEDYRERLSLLTENGLMAIVIVLVILALFLEYRLAFWVMIGMVISFIGG 376
Query: 374 LLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMHRSEAYRDAAKRMAW 433
+ L G++VN++ +F ++ +G++VD AIVV E Q+G +A K +A
Sbjct: 377 ITFLPWIGVSVNMISMFGFLVVLGIVVDDAIVVGENVFEYRQKGYGIMDAAIKGTKDVAQ 436
Query: 434 PITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLVMALLFVPVLGSLFGRPQ 493
P+ S TT+ AF PLL+ P TG+F LP ++ L+ SL+ AL +P S G +
Sbjct: 437 PVLFSILTTIIAFFPLLYIPGETGKFWWPLPAVVIVILSVSLIEALFILP---SHLGHIK 493
Query: 494 KVTQANQARMVALHNGDFSQATG--ITKAYYSTLAIAIRHPIKILCGALLMSAAIAFAYG 551
+ + + + F++ I Y+ L + L AL + + YG
Sbjct: 494 RRQKKGIILKLETYQAKFAKGFDWFIESYYHPFLDKCLEFKYITLSIALGLFVVVG-GYG 552
Query: 552 KAG-LGAEFFPEVDPPFFSVKVR----SYGDLSLNEKDRIMSDIEQVMLGHDEF---ESV 603
+ +G PEV +R + D + + + + ++ H+ + E +
Sbjct: 553 LSDHMGIILMPEVAADEIEAGIRLPVGTTPDQAAAVAEEVTTATRKMFEEHNLYEVAEGI 612
Query: 604 YTRTGGDDEIGV-VQITPVDWQYRRSVKAIIEELEQVTDTFPGVEIEYKFPDAGP-PVEH 661
T G + I V + + P D Q S + II GV+ + GP
Sbjct: 613 KTNVRGQNFIDVEIVMLPPD-QRDISAREIIALWRDNIGDIRGVDQITFEAERGPGGARQ 671
Query: 662 DLEIEISARVADDLDKAAQQVRLWAEANPALTNLSDNGSKPGIDWKIDIRRDDASRFAAD 721
+ +++S L+KA++ ++SDN +K + + +
Sbjct: 672 AISVDLSHTDIAVLEKASKAFVDKMNTFENTRDVSDNYNKGKVQYDFKL-LPQGRNLGLT 730
Query: 722 ATLVGNTVQFVTNGLKIGDYLPDDSDEEVDILVRYPSEYR-DIGRFDQLRVKTAQGL-VP 779
++ VG V+ G L + EV++ V+ P E R DI + ++TA G+ VP
Sbjct: 731 SSEVGRQVRNAFFGALAMRQL--RGNNEVEVRVKLPLEERKDIRNLEDFIIRTASGVEVP 788
Query: 780 LTNFAQIIPEQKQDTIHRVDGRRVISVMADLKEGYNLALELPAI-EQALRELNLP-SSVE 837
L + +++ ++ +I+R DGRRV++V D++ ++ L +I E L +L +
Sbjct: 789 LMDVVEVVQKEAFTSINRRDGRRVVNVGMDVEPSNAVSRVLASINESVLPQLRADFPGLT 848
Query: 838 FRIRGQNEEQEHSAVFLEKAFMVALAAMAIILITQFNSFYQAFLILTAVIFSTVGVFAGL 897
+ G + S L F +AL + +L F ++ Q +++TA+ F VG G
Sbjct: 849 WTFEGSQADMRESTDSLWGTFTMALLLIYALLALAFGNYTQPLIVMTAIPFGVVGAVIGH 908
Query: 898 LIFQKPFGIIMSGIGVIALAGIVVNNNIVLIDTYNQLLKRGLSREEAILRTGVQRLRPVL 957
++ ++ S +G+IALAG+VVN++++++D Y ++R L +AI G++R RP++
Sbjct: 909 ILLGYDLSLV-SLMGMIALAGVVVNDSLIMVD-YANKMRRDLPVFDAIHEAGLRRFRPIV 966
Query: 958 LTTVTTILGLLPMVLEMNIDIINQKIEFGAPSTQWWSQLATAVAGGLAFATVLTLVLTPC 1017
LTT+TT GL P++LE + + +A ++ G+ FAT + LV+ PC
Sbjct: 967 LTTLTTFGGLTPIILETSSQAF------------YLIPMAISLGFGIVFATSIILVIVPC 1014
Query: 1018 LLMLGRRRKGVS 1029
L + KG++
Sbjct: 1015 LYLSLEDVKGLA 1026
Score = 56.6 bits (135), Expect = 9e-12
Identities = 104/524 (19%), Positives = 210/524 (40%), Gaps = 53/524 (10%)
Query: 520 AYYSTLAIAIRHPIKILCGALLMSAAIAFAYGKAGLGAEFFPEVDPPFFSVKVRSYGDLS 579
AY +T ++A + +L G + Y + E FP+ F +V V G
Sbjct: 15 AYMATHSLAANILMLLLVGGGI--------YTMFTIQKEVFPQFQLDFVNVSVVYPGAAP 66
Query: 580 LNEKDRIMSDIEQVMLGHDEFESVY-TRTGGDDEIGVVQITPVDWQYRRSVKAIIEELEQ 638
+ I+ +E+ + G + + T G +I + + + R I++
Sbjct: 67 EEVEQGILMPVEEAIRGIQGIKEITSTANEGSAQISIELVAGTN---RMKAFQDIDQAVN 123
Query: 639 VTDTFPG--VEIEYKFPDAGPPVEHDLEIEISARVAD-DLDKAAQQVRLWAEANPALTNL 695
TFP E E D V +++ + V L K A+++R + P +T +
Sbjct: 124 RIRTFPDDIEEPEVVLQDRQRDV---MQLSLYGNVDIWTLRKLAERLRNRLLSQPEITQV 180
Query: 696 S-DNGSKPGIDWKIDIRRDDASRFAADATLVGNTVQFVTNGLKIGDYLPDDSDEEVDILV 754
S DN P + +I+I R + ++ V N V + + G + + IL+
Sbjct: 181 SLDN--VPDYETRIEIPRHNLRKYQLTLGQVANLVDQSSRDVPAGAIETNSGE----ILL 234
Query: 755 RYPSEYRDIGRFDQLRVKTAQG--LVPLTNFAQIIPEQKQDTIHRVDGRRVISVMADLKE 812
R + F + + ++ V L + A I ++ H + M +
Sbjct: 235 RMKERKQWAREFGDINIASSPSGAQVKLRDIATITDGFEETGFHGQFNQTPAVSMEIFRV 294
Query: 813 GYNLALELPA-IEQALRELNLPSSVEFRIRGQNEE--QEHSAVFLEKAFMVALAAMAIIL 869
G L++ + + L + LP V +RI E +E ++ E M + + +++
Sbjct: 295 GDQSPLDIEELVYELLDDFQLPPGVAYRIDSNRAEDYRERLSLLTENGLMAIV--IVLVI 352
Query: 870 ITQFNSFYQAFLILTAVIFSTVGVFAGLLIFQKPFGI---IMSGIGVIALAGIVVNNNIV 926
+ F + AF ++ ++ S F G + F G+ ++S G + + GIVV++ IV
Sbjct: 353 LALFLEYRLAFWVMIGMVIS----FIGGITFLPWIGVSVNMISMFGFLVVLGIVVDDAIV 408
Query: 927 LIDTYNQLLKRGLSREEAILRTGVQRLRPVLLTTVTTILGLLPMVLEMNIDIINQKIEFG 986
+ + + ++G +A ++ +PVL + +TTI+ P+ +
Sbjct: 409 VGENVFEYRQKGYGIMDAAIKGTKDVAQPVLFSILTTIIAFFPL------------LYIP 456
Query: 987 APSTQWWSQLATAVAGGLAFATVLTLVLTPCLL--MLGRRRKGV 1028
+ ++W L V L+ + + L + P L + R++KG+
Sbjct: 457 GETGKFWWPLPAVVIVILSVSLIEALFILPSHLGHIKRRQKKGI 500