Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1020 a.a., Cation/multidrug efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  274 bits (700), Expect = 3e-77
 Identities = 253/1045 (24%), Positives = 469/1045 (44%), Gaps = 104/1045 (9%)

Query: 16   LTLLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERLIVRPLEQEMRSI 75
            LT+L+F ++    T+L +     P V  PII V  ++ G +    E  I  PLE+ +  I
Sbjct: 20   LTILLFGIIG--MTFLGV--REYPSVDPPIINVRTTYVGANADVIEAQITEPLEESINGI 75

Query: 76   EGVKEMTATASEGHASVVLEFNVGVDLAKAMADVRDAVDLAKPKLPADSDEPTVNEVTLA 135
             G+K +T+T+++G +++ +EF+VG D+  A  DVRD V  A+  LP D++ P V++    
Sbjct: 76   SGIKSLTSTSNDGTSNITVEFDVGADMEAAANDVRDKVSRAQRNLPPDAEPPVVSKADAD 135

Query: 136  AEQPVLSVVLYGTVPERTTVLIARQLRD-----KLESFRQILSVDIAGDREEIVEIIVDP 190
            +E     +V      E+ ++L    + D     +L++   +  V I G++E  + + +DP
Sbjct: 136  SEP----IVFLNVKSEQKSLLQLSDIADNIFKERLQTIPGVSEVRIWGEKEYAMRLRMDP 191

Query: 191  LLMESYGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDVLELPIKVEGK 250
            + M SYG+   D+   +   N  + +G ++      SV+  S   +  +   L IK    
Sbjct: 192  IRMASYGVTPLDVLTKVQSENVELPSGRIEGSTIELSVRTKSRLSTPDEFNNLIIKESEN 251

Query: 251  QVITFGDVATVRKSFRDPESFARLDGKPAIVLDIKKRSGENIIETVELVKAVLGEAQARD 310
             ++ F DV     +  +  +  + DG P + + +    G N I+ V+     L     + 
Sbjct: 252  NIVRFQDVGNAELAPLNERTVLKRDGVPMVGVVLVPLPGSNSIDIVDEFYRRL--EFIKK 309

Query: 311  DWPNNLLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAIL-GVRTSLLVGVSIPGS 369
            D P ++ +   +D +E ++  ++++Q  IL A +LVV +I   L   RT+ +  ++IP S
Sbjct: 310  DLPEDIELGIGFDSTEYIRNSISEVQETILLAFLLVVAIIFLFLRDWRTTFIPVITIPIS 369

Query: 370  FLTGLLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMHRSEAYRDAAK 429
             +    ++     ++N++ L  +++++G++VD AIVV E    ++++G     A    A+
Sbjct: 370  LVGVFFIMYTMDFSINVLTLLGIVLSIGLVVDDAIVVLENIYSKIEKGEQPEAAAEKGAE 429

Query: 430  RMAWPITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLVMALLFVPVLGS-L 488
             + + + A+T    A F P++F    TG   +   + +  ++  S  +AL   P+L S L
Sbjct: 430  EIFFAVIATTIALAAVFLPVIFLTGTTGRLFREFGVVVAGSVIISSFVALTMTPMLSSKL 489

Query: 489  FGRPQKVTQANQARMVALHNGDFSQATG----ITKAYYSTLAIAIRHPIKILCGALLMSA 544
              + +K            HN  ++        + K Y + L   ++         L M  
Sbjct: 490  LKKREK------------HNWFYNVTEPGFLWLNKKYEAALVWFMQFRWVSFIIILAMGG 537

Query: 545  AIAFAYGKAGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIEQVMLGH------D 598
             I   +    + +E  P  D     + +      +    DR++ ++   M+        D
Sbjct: 538  GIYLLFNT--IPSELAPTEDRGEMRINMSGPEGATFEYMDRVIDELLYEMMTTIPSDVWD 595

Query: 599  EFESVYTRTGG--DDEIGVVQITPVDWQYRR-SVKAIIEELEQVTDTFPGVEIEYKFPDA 655
             F SV +   G      G +++  VD   R  S +A+ E++ ++      V+     P +
Sbjct: 596  SFISVTSPGFGTASTNSGFIRVRLVDASQRTVSQQAVFEDVAEILRKKTDVKAFASQPQS 655

Query: 656  ------GPPVEHDLEIEISARVADDLDKAAQQVRLWAE--ANPALTNLSDNG---SKPGI 704
                  G P+++ L+       A +L+K  + +  + +      +   SD     +KP I
Sbjct: 656  IGDRRGGMPIQYVLQ-------AQNLEKLKEVIPAFMDEVTQSPIFQFSDINLKFTKPEI 708

Query: 705  DWKIDIRRDDASRFAADATLVGNTVQ----------FVTNGLK---IGDYLPDDSDEEVD 751
            + +ID  R+ A         +  T+Q          F+ NG +   +G+   +D +E ++
Sbjct: 709  EVEID--REKARNIGVSVQEIARTLQLSYSGQRFDYFIMNGKQYQVVGEMQKEDRNEPIN 766

Query: 752  ILVRYPSEYRDIGRFDQLRVKTAQGLVPLTNFAQIIPEQKQDTIHRVDGRRVISVMADLK 811
            + + Y            +R +  Q LV L N   I  +     ++R +     +V A L 
Sbjct: 767  LRMLY------------VRAENGQ-LVQLDNLVNITEKSTPPQLYRFNRFVSATVSAGLA 813

Query: 812  EGYNLALELPAIEQALRELNLPSSVEFRIRGQNEEQEHSAVFLEKAFMVALAAMAIILIT 871
              Y +   L  +++   E+ L  S    + G ++E   S+  L  AF+ AL  + ++L  
Sbjct: 814  PKYTIGDGLDEMDRIAAEV-LDESFTTDVAGVSKEFRESSNSLIFAFLFALILIYLVLSA 872

Query: 872  QFNSFYQAFLILTAVIFSTVGVFAGLLIFQKPFGIIMSGIGVIALAGIVVNNNIVLIDTY 931
            QF SF     I+  V  +  G    L +      I  S IG+I L G+V  N I++++  
Sbjct: 873  QFESFTDPLTIMITVPLALFGALLSLWLGGYTLNIF-SQIGIIMLIGLVTKNGILIVEFA 931

Query: 932  NQLLKRGLSREEAILRTGVQRLRPVLLTTVTTILGLLPMVLEMNIDIINQKIEFGAPSTQ 991
            NQ    GL  +EAI+   V R RP+L+T+++TILG+LP+ L +           GA S  
Sbjct: 932  NQRKAHGLEVDEAIIGAAVARFRPILMTSLSTILGILPIALALGA---------GAESR- 981

Query: 992  WWSQLATAVAGGLAFATVLTLVLTP 1016
              S +  AV GGL  +T+LTL + P
Sbjct: 982  --SPMGVAVIGGLVLSTILTLFVIP 1004