Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1052 a.a., AcrB/AcrD/AcrF family protein from Agrobacterium fabrum C58

 Score =  295 bits (755), Expect = 1e-83
 Identities = 275/1064 (25%), Positives = 468/1064 (43%), Gaps = 76/1064 (7%)

Query: 2    FTLIDAALSRTRTMLTLLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAE 61
            F L   A+S       L   I+V G    + + ++  PD T  ++ V     G S  D +
Sbjct: 16   FNLSRWAISHPSIARFLFGLIIVMGALGVINMGQKEDPDFTFRVMVVQSVWPGASIDDMQ 75

Query: 62   RLIVRPLEQEMRSIEGVKEMTATASEGHASVVLEFNV---GVDLAKAMADVRDAVDLAKP 118
              +V  +E++++    +  + +    G A   ++      G D+A A   VR  V   K 
Sbjct: 76   NQVVNKIERKLQETPHLDWVKSYIRAGVAITTIQIKGDTNGADVADAFYQVRKKVGDIKQ 135

Query: 119  KLPADSDEPTVNE------VTLAAEQPVLSVVLYGTVPERTTVLIARQLRDKLESFRQIL 172
             LP+    P  N+      +TL A    +S   Y + PE     I  Q RD L +   + 
Sbjct: 136  DLPSGLLGPYFNDEFGDTYITLHA----ISGDGY-SYPELKKFAI--QARDMLIAMPGVE 188

Query: 173  SVDIAGDREEIVEIIVDPLLMESYGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPS 232
               I GD+ + + I V    +   GL   DI N +   N V  AG V+T      + V  
Sbjct: 189  KAVILGDQPQKIFIDVSSKALAERGLTVVDIQNALQGQNDVDPAGSVETADRSVRISVEG 248

Query: 233  VFESLKDVLELPIKVEGKQVITFGDVATVRKSFRDP-ESFARLDGKPAIVLDIKKRSGEN 291
               +  ++ EL +K  G QVI  GD+ATVR    DP +   R++G   + L +    G  
Sbjct: 249  DVTTPAEIRELRLKA-GDQVIRLGDIATVRDGLEDPFQRKFRVNGHDTVELGVVMAKGFK 307

Query: 292  IIETVELVKAVLGEAQARDDWPNNLLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVII 351
            + +  + ++      +  D  P  + V  I ++ E V   + +    ++ A+ +V++V +
Sbjct: 308  VTDVGKGIEETYKRFE--DTLPVGVEVTQISNQPEVVTEAVGEFTQALMEALGIVLIVSL 365

Query: 352  AILGVRTSLLVGVSIPGSFLTGLLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFAD 411
              +G R+ +++ V+IP      L ++   G+ +  + L ALI+A+G+LVD A++V E  +
Sbjct: 366  ISIGWRSGIVIAVAIPLVLAATLAIMFYMGIELQRISLGALIIALGLLVDDAMIVVEMME 425

Query: 412  RRMQEGMHRSEAYRDAAKRMAWPITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATL 471
            R+++EG++R +A   A    A+P+   T  T A F P+ F     GE+++ L   +   L
Sbjct: 426  RKLEEGLNRLDAASFAYSSTAFPMLTGTLITTAGFIPVGFAASTAGEYVRSLFFVVGIAL 485

Query: 472  TASLVMALLFVPVLGSLFGRPQKVTQANQARMVALHNGDFSQATGITKAYYSTLAIAIRH 531
              S  +A+ F P LG +           Q      H+  +   T   +    T+  A+RH
Sbjct: 486  VTSWFVAVYFTPWLGYMI--------LKQRAHAGTHHDAYD--TRFYRGVGHTVGWAVRH 535

Query: 532  PIKILCGALLMSAAIAFAYGKAGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIE 591
               +L   L + A +   +    +   FFP+   P   V +      ++ E +R    +E
Sbjct: 536  KAIVL--LLTLGAFVGSLWSFQFIPQSFFPQSSRPEILVDMWLPEGTAIKEVERQAKALE 593

Query: 592  QVMLGHDEFESVYTRTGGDDEIGVVQITPVDWQYRRSVKAI-------IEELEQ------ 638
              ++   + + V T  G   E       P+D Q R    A        +EE E+      
Sbjct: 594  AKIMDDPDKKFVATFIG---EGAPRFFLPLDQQLRNPNYAQLLVMSNGLEERERMIVKLR 650

Query: 639  --VTDTFPGVEIEYKFPDAGPPVEHDLEIEISARVADDLDKAAQQVRLWAEANPALTNLS 696
              + + FP V  +      GPPV   +++ +      ++   A QV+   E  P    + 
Sbjct: 651  KILAEDFPTVRGKVDRLFLGPPVGWAVQMRVVGPDRAEVRSIADQVKQRFEQQPNFGAVH 710

Query: 697  DNGSKPGIDWKIDIRRDDASRFAADATLVGNTVQFVTNGLKIGDYLPDDSDEEVDILVRY 756
            D+  +P    K+ I +D A      +  V   +Q  TNG  I D+   D +E V I+VR 
Sbjct: 711  DDWMEPVPAMKLVIDQDRARALGVSSQRVRQILQAATNGAAISDF--RDGEETVSIVVRE 768

Query: 757  PSEYRD-IGRFDQLRVKT-AQGLVPLTNFAQIIPEQKQDTIHRVDGRRVISVMADLKEGY 814
            P   R  +   + + + T   G VP +  A+++P  +Q    R D    I+V A L +G 
Sbjct: 769  PDATRSLLSAVNSVYIPTDIGGFVPASQIARVVPLLEQGIEWRRDRLPTITVKATLPDGV 828

Query: 815  NLALELPAIEQALREL--NLPSSVEFRIRGQNEEQEHSAVFLEKAFMVALAAMAIILITQ 872
                    +  ++ +L   LP+  +  I+G  E+   S   +     + L  + ++L+ Q
Sbjct: 829  EPTQVTMNLYNSMADLRAKLPAGYKVEIQGGAEDAAESQQSIAAKAPIMLLVILVLLMIQ 888

Query: 873  FNSFYQAFLILTAVIFSTVGVFAGLLIFQKPFGIIMSGIGVIALAGIVVNNNIVLIDTYN 932
               F +A L+L       +G    LLI   PFG + + +GVIAL GI++ N+I+L+D  +
Sbjct: 889  LQHFGKAMLVLATGPLGIIGAAMALLITGAPFGFV-AILGVIALLGIIMRNSIILVDQID 947

Query: 933  QLLKRGLSREEAILRTGVQRLRPVLLTTVTTILGLLPMVLEMNIDIINQKIEFGAPSTQW 992
            Q +  G  R EAI+   V+R RP++LT +T +L L+P+   +                 +
Sbjct: 948  QDIAAGHPRAEAIVGAAVRRFRPIMLTALTAVLALIPISRGL-----------------F 990

Query: 993  WSQLATAVAGGLAFATVLTLVLTPC--LLMLGRRRKGVSEDEAP 1034
            W  +A A+ GG+  ATVLT+++ P    L  GR  K   EDE P
Sbjct: 991  WGPMAYAMMGGILVATVLTILVLPAAYALFFGREPKAKKEDEKP 1034