Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1048 a.a., AcrB/AcrD/AcrF family protein from Agrobacterium fabrum C58

 Score =  320 bits (819), Expect = 4e-91
 Identities = 265/1034 (25%), Positives = 480/1034 (46%), Gaps = 68/1034 (6%)

Query: 18   LLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERLIVRPLEQEMRSIEG 77
            ++V +LV G  +   +  +  P+V +P++ V  S+ G +P   E  + RP+E  + +I G
Sbjct: 17   MMVALLVMGAFSLQRLGLDQYPNVDVPVVVVVTSYPGATPETVEMEVTRPVEDALNAIGG 76

Query: 78   VKEMTATASEGHASVVLEFNVGVDLAKAMADVRDAVDLAKPKLPADSDEPTVNEVTLAAE 137
            + E+T+T+ EG + VV +F + V  + A  +VRD +   +   P D+ +P ++    AAE
Sbjct: 77   LDEVTSTSYEGRSVVVAKFKLEVQSSAAAQEVRDKIAAIEANFPEDTKKPVISRFDPAAE 136

Query: 138  QPVLSVVLYGT---VPERTTVLIARQLRDKLESFRQILSVDIAGDREEIVEIIVDPLLME 194
             P+LS+ +  T   VP   T+   + +R +L +   I    + G R+  +++ +D   M 
Sbjct: 137  -PILSLAISSTSLDVPALATLAEQKVVR-QLTTVAGIGQATLVGGRKRQIDVTIDETRMR 194

Query: 195  SYGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDVLELPIKVEGKQVIT 254
            + G+  +++   +   N    AG V       ++++ S  E  + +L++ +   G   I 
Sbjct: 195  ALGIGVNEVVTALRAGNSNSPAGSVVDPVSERTIQIQSRIEEPEALLDMVVARRGGVAIL 254

Query: 255  FGDVATVRKSFRDPESFARLDGKPAIVLDIKKRSGENIIETVELVKAVLGEAQARDDWPN 314
              DVAT+ +   D E+ A  +G+ A+ +DI K    N ++ V  V+  L    A    P 
Sbjct: 255  LRDVATLSEGAADAENRAIYNGQTALAIDIVKVQDANTVQVVSDVRKRLDALNAELS-PQ 313

Query: 315  NLLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAILGV-RTSLLVGVSIPGSFLTG 373
            N+ ++ + D S  ++  +  +Q  ++    L V ++   L   R++++ G+++P + +  
Sbjct: 314  NIQLRIVTDSSIPIQESVTQVQTTLIEGAALAVAIVFLFLNSWRSTVITGLTLPIAIIGT 373

Query: 374  LLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMHRSEAYRDAAKRMAW 433
            L V+   G T+N + L AL +++G+LVD AIVV E   R +  G     A  D    +  
Sbjct: 374  LTVVDFLGFTLNTLSLLALTLSIGILVDDAIVVRENITRHLHMGKSHLRAALDGTGEIGL 433

Query: 434  PITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLVMALLFVPVLGSLFGRPQ 493
             + A+TAT +A F P+ F   + G F     +T+ A +  SL +A    P+L S++  P 
Sbjct: 434  AVIATTATIVAVFLPVAFMDGIVGRFFYQFGVTVSAAVLISLFVAFTLDPMLSSVWYDPD 493

Query: 494  KVTQANQ---ARMVALHNGDFSQATGITKAYYSTLAIAIRHPIKILCGALLMSAAIAFA- 549
                A +    R++A  +  F    G    Y   +   +RH +      LL++A I    
Sbjct: 494  AQADAKRGPIGRLIARFDHGFEWMAG---QYRHAIDWTLRHRLV----TLLVTAGIFIGS 546

Query: 550  -YGKAGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIEQVMLGHDEFESVYTRTG 608
             +    +G EF P+ D   F + + +    SL+     +  +++ +    E E +Y+   
Sbjct: 547  LFMVPLVGTEFVPDADEGRFQINLTAPVGSSLDYTTAKLQQVKKALREFPEVEMLYSTIN 606

Query: 609  GDDEIG------VVQITPVDWQYRRSVKAIIEELEQVTDTFPGVEIEYKFPDAG---PPV 659
                 G      +V + P+  +  ++  ++ E + +     PG+EI       G    PV
Sbjct: 607  TGGAAGKHRAAILVGLVPLSAR-EQTPLSLAEPVRKRLSAIPGIEINILQNGLGGGESPV 665

Query: 660  EHDL---EIEISARVADDLDKAAQQVRLWAEANPA---LTNLSDNGSKPGIDWKIDIRRD 713
            +  +   +  +  ++A+ L +  +++    E   +   +T++     KP     + I R 
Sbjct: 666  QLSILGDDRAVLEKIANGLVEDMKKIPGLVEVTSSTKDVTSILSVRLKPAAASDLGIARA 725

Query: 714  DASRFAADATLVGNTVQFVTNGLKIGDYLPDDSDEEVDILVRYPSEYR-DIGRFDQLRVK 772
            D +  AA + L+G        G  +  +  D      DI+VR P E R D  R  +L + 
Sbjct: 726  DLA--AALSALIG--------GEDVSKW-TDAHGNSYDIVVRLPVERRSDAARLGELMIT 774

Query: 773  T-------AQGLVPLTNFAQIIPEQKQDTIHRVDGRRVISVMADLKEGYNLALELPAIEQ 825
            T       A  +V L   A I        I R D RR I V A++  G  L      ++ 
Sbjct: 775  TGRTGANGAPLMVRLDQVADIGTVAAPAEIRRFDNRREILVSANI-TGRTLGDVTETLQG 833

Query: 826  ALRELNLPSSVEFRIRGQNEEQEHSAVFLEKAFMVALAAMAIILITQFNSFYQAFLILTA 885
                 +LP+    R  G+ E  + +   +  A  +A+  + I+L +QF SF Q   I+ +
Sbjct: 834  LTASRDLPAGYRIRFGGEAETMQETVGHMGTALSMAIIFIYIVLASQFGSFLQPLAIMVS 893

Query: 886  VIFSTVGVFAGLLIFQKPFGIIMSGIGVIALAGIVVNNNIVLIDTYNQLLKRGLSREEAI 945
            +  S +GV  GL++       + S IG I L G+V  N I+L+D  N+  +RGL+  EA+
Sbjct: 894  LPLSLIGVLLGLMVAGSTIN-MFSLIGFIMLMGLVTKNGILLVDFANRERRRGLTLNEAL 952

Query: 946  LRTGVQRLRPVLLTTVTTILGLLPMVLEMNIDIINQKIEFGAPSTQWWSQLATAVAGGLA 1005
               GV R RP+++TT+  I G++P+ L +           G    Q  + +A AV GGL 
Sbjct: 953  ANAGVIRFRPIIMTTLAMIFGMIPLGLAV-----------GGGGAQ-RAPMAHAVVGGLI 1000

Query: 1006 FATVLTLVLTPCLL 1019
             +T+LTL++ P +L
Sbjct: 1001 SSTLLTLIVVPVIL 1014