Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1023 a.a., AcrB/AcrD/AcrF family protein from Agrobacterium fabrum C58

 Score =  276 bits (705), Expect = 7e-78
 Identities = 268/1068 (25%), Positives = 463/1068 (43%), Gaps = 88/1068 (8%)

Query: 2    FTLIDAALS-RTRTMLTLLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDA 60
            F L D AL  R+     +LVF+L AGV +YL + +E  P+ TI  + +S    G S  + 
Sbjct: 4    FNLSDWALEHRSLVWYFMLVFVL-AGVFSYLNLGREEDPNFTIKTMVISAQWPGASAEEV 62

Query: 61   ERLIVRPLEQEMRSIEGVKEMTATASEGHASVVLEF---NVGVDLAKAMADVRDAVDLAK 117
             R +   +E+++  ++ +  + +    G  ++ +E        ++      VR+ +   K
Sbjct: 63   ARQVTDRIEKKLEELDNLDHLRSQTVAGRTTIFVELVPETKARNVEPTWVRVRNMIGDIK 122

Query: 118  PKLPADSDEPTVNEVTLAAEQPVLSVVLYGTVPERTTV-LIARQLRDKLESFR------- 169
             + P+    P  N+             +YG +   T+  L  RQLRD +E  R       
Sbjct: 123  GEFPSGVVGPFFND---------RFGDVYGNIYAFTSDGLSQRQLRDLVEDARAKVLTVD 173

Query: 170  QILSVDIAGDREEIVEIIVDPLLMESYGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVK 229
             I  VD+ G ++E + +      + + G+DQ  I   +   N V  +GFV+ G  R +++
Sbjct: 174  DIGKVDVIGAQDEAIYLEFSTRQIAALGIDQQSIIKTLQSQNAVTQSGFVNAGPERVALR 233

Query: 230  VPSVFESLKDVLELPIKVEGKQVITFGDVATVRKSFRDP-ESFARLDGKPAIVLDIKKRS 288
            V   F S   +  + ++V  +      +VAT+R+ + DP  S  R +G+PAI L I  ++
Sbjct: 234  VSGQFTSEDSLRSINLRVNNR-FFPLTEVATIRRGYVDPPSSLFRFNGQPAIGLAIGMKT 292

Query: 289  GENIIETVELVKAVLGEAQARDDWPNNLLVKTIWDESEDVKLMLNDLQNNILSAIILVVV 348
            G N++   E + A +    A  D P  + V  + D+   V   ++   + +  AI +V+V
Sbjct: 293  GANLLHFGEALDAQMKRVVA--DLPVGVDVHRVSDQPAVVDEAVSGFTSALFEAIAIVLV 350

Query: 349  VIIAILGVRTSLLVGVSIPGSFLTGLLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTE 408
            +    LG+R  ++V VSIP       + +   G+++  + L ALI+A+G+LVD A++  E
Sbjct: 351  ISFISLGLRAGMVVAVSIPLVLAITFVYMEYTGISLQRISLGALIIALGLLVDDAMIAVE 410

Query: 409  FADRRMQEGMHRSEAYRDAAKRMAWPITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLM 468
                R++ G    +A        A+P+   T  T+A F P+       GEF   L + + 
Sbjct: 411  MMVARLEVGDDLRKAATYVYTSTAFPMLTGTLVTVAGFIPVGLNNSAAGEFTFTLFVVIA 470

Query: 469  ATLTASLVMALLFVPVLG-SLFGRPQKVTQANQARMVALHNGDFSQATGITKAYYSTLAI 527
             +L  S ++A+LF P+LG ++  +  K     + R  +     FS   G    +      
Sbjct: 471  VSLIVSWIVAVLFTPLLGVTILPKTMKSHHEKKGRFAS----GFSWLLGRALRW------ 520

Query: 528  AIRHPIKILCGALLMSAAIAFAYGKAGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIM 587
                 + I+    L + +I    G + +  +FFP  D     V      + S+ E +R M
Sbjct: 521  ---RWVTIVATVALFALSIG---GMSLVQQQFFPSSDRVELIVDWNLPQNSSIAETNRQM 574

Query: 588  SDIEQVMLGHD---EFESVYTRTGG------------DDEIGVVQITPVDWQYRRSVKAI 632
            +  EQ ML  +   +  + Y   G             D   G   I       R  V+A 
Sbjct: 575  AQFEQEMLAKNTDIDHWTTYVGEGAPRFILSFDVQTPDVTFGQTVIVTKGLDVRDKVRA- 633

Query: 633  IEELEQVTD-TFPGVEIEYKFPDAGPPVEHDLEIEISARVADDLDKAAQQVRLWAEANPA 691
              EL+   D TF G +   K  D GPPV   ++  +S      + +  QQ+      +  
Sbjct: 634  --ELQDYLDRTFIGTDAFVKLLDIGPPVGKPVQYRLSGPDIQKVRELGQQLSGIVGEHRL 691

Query: 692  LTNLSDNGSKPGIDWKIDIRRDDASRFAADATLVGNTVQFVTNGLKIGDYLPDDSDEEVD 751
            L+NL  + ++P    K+D+ +D A +    +  + N +  +  G  +      D    V+
Sbjct: 692  LSNLVMDWNEPTRVVKVDVLQDKARQLGVSSEDIANAMNSIVEGSTVTQV--RDDIYLVN 749

Query: 752  ILVRYP-SEYRDIGRFDQLRVKTAQG-LVPLTNFAQIIPEQKQDTIHRVDGRRVISVMAD 809
            ++ R   +E   I     L++    G  VPL+  A    E +Q TI R D    ++V A 
Sbjct: 750  VVARAQLAERGSIETLQNLQLPATNGKAVPLSAIANFRYELEQPTIWRRDRIPTVTVKAA 809

Query: 810  LKEGYNLALELPAIEQALR--ELNLPSSVEFRIRGQNEEQEHSAVFLEKAFMVALAAMAI 867
            +      A  +  ++  L   E  LP   +    G  E    S   +     + L AMA 
Sbjct: 810  IIGPTQPATIVEQLKPKLEAFEKMLPVGYKLETGGSVESSADSQAPIVAVVPLMLFAMAT 869

Query: 868  ILITQFNSFYQAFLILTAVIFSTVGVFAGLLIFQKPFGIIMSGIGVIALAGIVVNNNIVL 927
            IL+ Q  SF + FL+      + +GV   LL    P G + + +GV+AL GI++ N+++L
Sbjct: 870  ILMVQLQSFSRLFLVFAVAPTALIGVVVALLFSNAPMGFV-AILGVLALIGILIRNSVIL 928

Query: 928  IDTYNQLLKRGLSREEAILRTGVQRLRPVLLTTVTTILGLLPMVLEMNIDIINQKIEFGA 987
            +     L   G+S   A++     R+RP++LT     L L+P+  E+             
Sbjct: 929  VVQIEHLRSEGVSAWRAVIEATEHRMRPIMLTAAAATLALIPISREI------------- 975

Query: 988  PSTQWWSQLATAVAGGLAFATVLTLVLTPCLLMLGRRRKGVSEDEAPQ 1035
                +W  +A A+ GG+   T LTL+  P L +   R     ED+ P+
Sbjct: 976  ----FWGPMAYAMMGGIVVGTALTLLFLPALYVAWFRIP--REDDKPE 1017