Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1048 a.a., AcrB/AcrD/AcrF family protein from Agrobacterium fabrum C58

 Score =  280 bits (715), Expect = 5e-79
 Identities = 257/1031 (24%), Positives = 467/1031 (45%), Gaps = 52/1031 (5%)

Query: 18   LLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERLIVRPLEQEMRSIEG 77
            L   ++VAG+A  + +     PDV  P I V  +++G +P   ++ + + +E  +  + G
Sbjct: 28   LNTLLVVAGLAALVGVEVRELPDVDRPSISVRTTYEGAAPETIDQEVTQTIEGAVARVSG 87

Query: 78   VKEMTATASEGHASVVLEFNVGVDLAKAMADVRDAVDLAKPKLPADSDEPTVNEVTLAAE 137
            +K + +++  G + V +EF+  VD+A A  DVRDA+     +LP D+DEP + +   +  
Sbjct: 88   IKSIASSSQFGTSRVTMEFSDNVDMAVAANDVRDAIGRVTNQLPDDADEPQIIKAD-SDS 146

Query: 138  QPVLSVVLYGTV--PERTTVLIARQLRDKLESFRQILSVDIAGDREEIVEIIVDPLLMES 195
            QP++ + +  +    E  T L+  ++ D+L +   +  V++ GD+E++  + ++   + S
Sbjct: 147  QPIMRLAVTSSTLSMEDLTKLVDDEIIDRLAAVDGVADVELYGDQEKVFRVDLNQAALAS 206

Query: 196  YGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDVLELPIKVEGKQVITF 255
             GL  +D+ N +A     V AG + +      V+  +     +D   L IK      I  
Sbjct: 207  RGLTVTDVSNALASAALDVPAGSLKSTTQDIVVRATASLTKPEDFSNLLIKDN----IRL 262

Query: 256  GDVATVRKSFRDPESFARLDGKPAIVLDIKKRSGENIIETVELVKAVLGEAQARDDWPNN 315
             DVATV     D  +  R +G   + L + +++  N +     VKA +    A  + P  
Sbjct: 263  RDVATVMLGADDQSTSLRSNGVQGVGLGVIRQAQSNTLNISTGVKAAVDAMSA--NLPEG 320

Query: 316  LLVKTIWDESEDVKLMLNDLQNNI-LSAIILVVVVIIAILGVRTSLLVGVSIPGSFLTGL 374
              +    D++  ++  L++++  + LSA+I+VVV+ +     R +L+  +++P + +  +
Sbjct: 321  TRIVVTSDDAVFIEGALHEVELALGLSALIVVVVLYLFFRDWRATLIPAITMPVALIGTI 380

Query: 375  LVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMHRSEAYRDAAKRMAWP 434
            + + + G +VNI+ L A+++A G++VD AIVV E   RR  EGM    A     + + + 
Sbjct: 381  VAIYMVGFSVNILTLLAIVLATGLVVDDAIVVLENIVRRRAEGMGPRAAAVLGTQEVFFA 440

Query: 435  ITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLVMALLFVPVLGSLFGRPQK 494
            + A+TAT  A F PL F P   G   +     L   +  S + AL   P+L S   R  K
Sbjct: 441  VIATTATLAAVFIPLSFLPGQLGGLFREFGFVLAFAVGLSSITALTLCPMLAS---RMLK 497

Query: 495  VTQANQARMVALHNGDFSQATGITKAYYSTLAIAIRHPIKILCGALLMSAAIAFAYGKAG 554
                     +      F+        Y +TLA  + +P+ ++  AL+ S     A+G   
Sbjct: 498  QGLKEPTGPLMWFGNVFA------STYKTTLAACLNNPLIVIVVALIFSGLSWIAFGM-- 549

Query: 555  LGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIE---QVMLGHDEFESVYTRTG--G 609
            +  E  P  D     ++V +   +SL      +  IE   Q +    E  +VY+ TG  G
Sbjct: 550  IQNELTPREDRASVMMRVTAPQGVSLEYTRDQLQRIEENLQPLRDSGEIRNVYSITGMNG 609

Query: 610  DDEIGVVQITPVDWQYR-RSVKAIIEELEQVTDTFPGVEIEYKFPDA--GPPVEHDLEIE 666
                G + +T   W  R R+   I  ++    +  P +      P++       + L++ 
Sbjct: 610  SSNTGFMVLTLAPWADRERTQNQIAADVTSAANKVPALRGNAMQPNSLRIRGAGNGLQMA 669

Query: 667  ISARVADDLDKAAQQVRLWAEANPALTNLSDNGSKPGIDWKIDIRRDDASRFAADATLVG 726
            +       L +A Q++ L  E          +         + I R+ AS    D T + 
Sbjct: 670  MVGSNYPALTEATQKLLLSMEEGGLFDTPRLDNEPNQAQLSVSIDRERASDLGIDITGLS 729

Query: 727  NTVQFVTNGLKIGDYLPDDSDEEVDILVRYPSEYRDIG---RFDQLRVKTAQG-LVPLTN 782
             ++Q +  G  I D   D       I VR  S  R I      + + +KT  G +VP++ 
Sbjct: 730  RSMQSLLEGRSIVDVFVDGD----AIPVRLLSSTRPINDPTDLENVFLKTGDGKIVPMSV 785

Query: 783  FAQIIPEQKQDTIHRVDGRRVISVMADLKEGYNLALELPAIEQALRELNLPSSVEFRIRG 842
             A +        ++R      +   A+LK+G +L   +  + + L +  +PS       G
Sbjct: 786  IATLKENAVAPQLNREQQLPSVGFTANLKDGVSLGQAMEKVNE-LAQSVMPSGARLLPLG 844

Query: 843  QNEEQEHSAVFLEKAFMVALAAMAIILITQFNSFYQAFLILTAVIFSTVGVFAGLLIFQK 902
            +    E ++  +   F  A+A + ++L  QF S   + +I++ V          LL+   
Sbjct: 845  EAATLEENSSGMLLTFGFAIAIIFLVLAAQFESVLSSVIIMSTVPLGLACAVIALLVTGS 904

Query: 903  PFGIIMSGIGVIALAGIVVNNNIVLIDTYNQLLKRGLSREEAILRTGVQRLRPVLLTTVT 962
                + S IG++ L G++  N I++++  N L  +G +  EAI +    RLRPV++T + 
Sbjct: 905  SLN-VYSQIGLVLLVGVMAKNGILIVEFANHLRDQGATVREAIEKATSIRLRPVMMTMIA 963

Query: 963  TILGLLPMVLEMNIDIINQKIEFGAPSTQWWSQLATAVAGGLAFATVLTLVLTP-CLLML 1021
            TILG +P+VL             GA +      L   + GGL FAT++TL +TP   L++
Sbjct: 964  TILGGVPLVLAQGA---------GAEAR---IALGWVIVGGLGFATLVTLYITPVSYLLI 1011

Query: 1022 GRRRKGVSEDE 1032
             R  K  +++E
Sbjct: 1012 ARFAKPQADEE 1022