Pairwise Alignments

Query, 1039 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1034 a.a., Multidrug resistance protein MdtC from Acinetobacter radioresistens SK82

 Score =  311 bits (797), Expect = 2e-88
 Identities = 251/1026 (24%), Positives = 472/1026 (46%), Gaps = 49/1026 (4%)

Query: 16   LTLLVFILVAGVATYLTIPKESSPDVTIPIIYVSVSHQGISPSDAERLIVRPLEQEMRSI 75
            + +++ ++V G+A++  +  E  PDV  P + V  S+ G SP   E  I + +E ++ +I
Sbjct: 15   IMMMLCLMVLGLASWQRMGVEEYPDVDFPFVVVYTSYPGASPETVESEITKKMEDQINTI 74

Query: 76   EGVKEMTATASEGHASVVLEFNVGVDLAKAMADVRDAVDLAKPKLPADSDEPTVNEVTLA 135
             G+K++T+T+SEG +++V EF++ +  + A  DVRD +     +   + ++P V      
Sbjct: 75   SGLKKLTSTSSEGLSTIVAEFDLDISSSVAAQDVRDKIASVTAQFRDEIEDPVVERYD-P 133

Query: 136  AEQPVLSVVLYG---TVPERTTVLIARQLRDKLESFRQILSVDIAGDREEIVEIIVDPLL 192
                ++S+V      ++ + ++ L  R L  +L +   + +V++ GD +  + I VDP  
Sbjct: 134  TSSAIMSLVFESNNMSLKDLSSYLDQRIL-PQLRTVEGVGNVNLLGDAQRQIRIAVDPKK 192

Query: 193  MESYGLDQSDIYNLIALNNRVVAAGFVDTGYGRFSVKVPSVFESLKDVLELPIKVEGKQV 252
            + S+G+    + N +   N  +  G +        V++ +   +     EL I  +    
Sbjct: 193  LRSFGVGIDQVINTLKNENVQIPGGALQQPDSELVVEIQAKVLNPYQFGELIIANKQGTP 252

Query: 253  ITFGDVATVRKSFRDPESFARLDGKPAIVLDIKKRSGENIIETVELVKAVLGEAQARDDW 312
            +    VAT+  S  + E+ A L+GK A+ +DI + +  NI++ V+    V+   + +   
Sbjct: 253  VYLKQVATITDSQAEMETAAYLNGKSAVAIDILRSADANIVDVVKNAYQVIDRIEQQ--L 310

Query: 313  PNNLLVKTIWDESEDVKLMLNDLQNNILSAIILVVVVIIAILG-VRTSLLVGVSIPGSFL 371
            P    +K + D SE ++  + D+   I+   +L +++++  LG  R++++ G+++P + L
Sbjct: 311  PAGTTLKVVVDNSESIQSTIKDVARTIVEGAVLAIIIVLLFLGSFRSTVITGLTLPIALL 370

Query: 372  TGLLVLAVFGLTVNIVVLFALIMAVGMLVDGAIVVTEFADRRMQEGMHRSEAYRDAAKRM 431
              L  +  FG T+N++ L AL +++G+L+D AIVV E   R    G     A  D  K +
Sbjct: 371  GTLTFIWAFGFTINMMTLLALSLSIGLLIDDAIVVRENIVRHSDMGKDHVTAALDGTKEI 430

Query: 432  AWPITASTATTLAAFAPLLFWPDVTGEFMKYLPLTLMATLTASLVMALLFVPVLGSLFGR 491
               + A+T T +A F P+ F   + G F     +T+   +  S+ ++    P+L + +  
Sbjct: 431  GLAVLATTLTIVAVFLPVAFMGGIIGRFFYQFGVTVSTAVLISMFVSFTLDPMLSAHWAE 490

Query: 492  PQKVTQANQARMVALHNGDFSQATGITKAYYSTLAIAIRHPIKILCGALLMSAAIAFAYG 551
             +K     Q  +         +   +T  Y   L +A+R  +  +  A+L S   AFA  
Sbjct: 491  -RKDRPKKQNTLTRFFAWTSKKLDDLTAVYEKLLRLALRFRLLTVLIAVL-SLFGAFALS 548

Query: 552  KAGLGAEFFPEVDPPFFSVKVRSYGDLSLNEKDRIMSDIEQVMLGHDEFESVYTRTGGDD 611
            K  +G EF P  D     VK  +  D SL      +  +E ++  H E ++ Y    G  
Sbjct: 549  KL-IGTEFVPTPDKGSIRVKFETPVDASLQYTQAKLQQVENIIRQHPEVQTTYGVINGMT 607

Query: 612  EIGV------VQITPVDWQYRRSVKAIIEELEQVTDTFPGVEIEYKFPDAGPPV---EHD 662
            + G       V +TP   +  +++  +  +L        G+ I      A   V      
Sbjct: 608  DRGKNHGSIRVTVTP-RHEREQTLNDLNNDLRNRLQQVGGITIT-SVASADEVVSGGRKP 665

Query: 663  LEIEISARVADDLDKAAQQVRLWAEANPALTNLSDNGSKPGIDWKIDIRRDDASRFAADA 722
            ++I I     D+L + + +     +    + +L  +  +P     + I R  AS      
Sbjct: 666  IQISIKGPDLDELQRISDRFMAEMKKINGVVDLETSLKEPKPTLSVSINRVLASDLGLSV 725

Query: 723  TLVGNTVQFVTNGLKIGDYLPDDSDEEVDILVRYPSEYRDIGRFDQLRVKTAQG------ 776
              + N V+ +  G  +  +  D+  E  D+ +R     R +    Q    T++       
Sbjct: 726  NQIANVVRPLIAGDNVTTW-EDERGENYDVNLRLSENARTLPSDIQNMYITSEKLDNNNQ 784

Query: 777  --LVPLTNFAQIIPEQKQDTIHRVDGRRVISVMADL--KEGYNLALELPAIEQALRELNL 832
              LVPL   A          I+R +  R + + A+   +   ++  ++ A++    +  L
Sbjct: 785  NILVPLATVASFKETSGASQINRRELSREVLIEANTSGRPAGDIGGDIDAMQ---AQFKL 841

Query: 833  PSSVEFRIRGQNEEQEHSAVFLEKAFMVALAAMAIILITQFNSFYQAFLILTAVIFSTVG 892
            P    F   G N +   S  +   A  +++  + I+L +QFNSF     I+ ++  S +G
Sbjct: 842  PPGYSFDTEGANADMAESLGYAITAITLSIVFIYIVLGSQFNSFIHPAAIMASLPLSLIG 901

Query: 893  VFAGLLIFQKPFGIIMSGIGVIALAGIVVNNNIVLIDTYNQLLKRGLSREEAILRTGVQR 952
            VF  L +F      + S IG+I L G+V  N I+LID   + ++ G+ R +AI+  G  R
Sbjct: 902  VFLALYLFNSTMN-LFSIIGIIMLMGLVTKNAILLIDFIKKGIESGMDRYDAIVAAGTTR 960

Query: 953  LRPVLLTTVTTILGLLPMVLEMNIDIINQKIEFGAPSTQWWSQLATAVAGGLAFATVLTL 1012
            LRP+L+TT   ++G++P+ L +         E G  S    S +A AV GG+  +T+LTL
Sbjct: 961  LRPILMTTSAMVMGMVPLALGLG--------ESGEQS----SPMAHAVIGGVITSTLLTL 1008

Query: 1013 VLTPCL 1018
            V+ P +
Sbjct: 1009 VVVPII 1014