Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 64.3 bits (155), Expect = 4e-15
 Identities = 45/181 (24%), Positives = 85/181 (46%), Gaps = 13/181 (7%)

Query: 85  IGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKAQLKVRQQ--EFNAASAL 142
           + A++ G + +V +   Q+V K  ++  ID       +++A++ +  R+   E    +A 
Sbjct: 46  VAADVTGEVVDVPVRDNQLVKKGDLLMQIDPEHYRIAVKQAQSLVASRKATWEMRKVNAH 105

Query: 143 KNKGLQGEV--------AFTNAAAALTDAQSSLSTVQRL---LDNTQVRAPFDGVVETLP 191
           +   L   V        A   A +AL D Q +L+ ++     L  TQV A  DG V  L 
Sbjct: 106 RRADLDALVISKENRDDASNIADSALADYQHALAQLEAAELNLKRTQVVAAVDGYVTNLN 165

Query: 192 IEKGDFVGIGDPVASIIDLHKLVIEADVSERHIQHVQLEQAARIRFIDGTQTQGKVRYIS 251
           + +GD+  IG+   +++D++   +     E  + HV++   A ++ + G   +G V  IS
Sbjct: 166 VHRGDYARIGEAKMAVVDMNSFWVYGFFEETKLPHVKVGDKADMQLMSGETLKGHVESIS 225

Query: 252 R 252
           R
Sbjct: 226 R 226