Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., RND transporter from Pseudomonas simiae WCS417

 Score = 71.6 bits (174), Expect = 3e-17
 Identities = 48/214 (22%), Positives = 95/214 (44%), Gaps = 2/214 (0%)

Query: 85  IGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKAQLKVRQQEFNAASALKN 144
           +  EIAG + +V+   GQ V   Q +  +D     A LE A+A L + Q ++   S L  
Sbjct: 72  LSLEIAGTVKDVQFESGQKVKTGQPLVQLDSAVESALLETAQADLGLAQLDYGRGSQLVG 131

Query: 145 KGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAPFDGVVETLPIEKGDFVGIGDPV 204
                +  F   +A L   +++++ ++  L    + APF G +    ++ GD++  G  +
Sbjct: 132 SQAISKGEFDRLSAQLQKNKATVNQLKASLAKKHIVAPFGGTIGIRQVDVGDYLASGTVI 191

Query: 205 ASIIDLHKLVIEADVSERHIQHVQLEQAARIRF--IDGTQTQGKVRYISRLSSPATNTFA 262
           A++ DL  L ++  + E  +  V   Q  ++      G Q  G +  I+     +T    
Sbjct: 192 ATLQDLSSLYVDFYIPEHAVPKVAPGQPVQVEVSAYPGEQFPGSISAINPKVENSTRNVL 251

Query: 263 IEVEVDNPQQAIPAGVSAEVELSLMSQAAIKITP 296
           +   + NP+  +  G+   +++ L + A   + P
Sbjct: 252 VRATLANPEGKLLPGMFTRLDVLLPNPAPQIVVP 285