Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., Tetrapartite efflux system, membrane fusion component FusE-like from Variovorax sp. SCN45

 Score = 64.7 bits (156), Expect = 3e-15
 Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 27/203 (13%)

Query: 75  GRTAPDRQAKIGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKAQL----- 129
           GR   D   ++  +++G +++V +   Q V    ++  +D+   +   ++A+A +     
Sbjct: 52  GRVRAD-VVQVAPDVSGLVSDVAVRDNQSVAAGALLFAVDRARFELAEQQAEAAVAAQAA 110

Query: 130 KVRQQEFNAASALK----NKGL-----------------QGEVAFTNAAAALTDAQSSLS 168
            V  Q    A A +    N GL                 Q   A  +A AAL  AQ +L 
Sbjct: 111 SVGNQRILIAQAHRENNRNSGLGDLVSQEVREQSRLRLDQANSALRSAEAALRQAQVALD 170

Query: 169 TVQRLLDNTQVRAPFDGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEADVSERHIQHVQ 228
           T +  L  T+VRAP  G+V  L + +G +   G PV +++D   + +E    E  +  + 
Sbjct: 171 TARLNLRRTEVRAPTAGLVTNLDLRQGAYASAGHPVMALVDADSVYVEGYFEENKLARIH 230

Query: 229 LEQAARIRFIDGTQTQGKVRYIS 251
           L    R+  +D    +G V  I+
Sbjct: 231 LGDRVRVTPMDADAIEGAVESIA 253