Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 74.7 bits (182), Expect = 4e-18
 Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 6/245 (2%)

Query: 42  EEPQTAMEIQVPLAKVGYQTFSATQTDKVIELYGRTAPDRQAKIGAEIAGRIAEVKIAKG 101
           E PQ  +    P+ K       A+Q    +   G     ++A +   I+GR+ ++ + +G
Sbjct: 31  EAPQ--ISAPAPVVKPALTEIVASQRASDLTFNGVVRAAQRADLAFRISGRLTDIAVKEG 88

Query: 102 QMVTKNQIIALIDKGDLDAQLERAKAQLKVRQQEFNAASALKNKGLQGEVAFTNAAAALT 161
             V K Q++A +D  D    LE A+ +LK  +QE+  A A+  K      A  +      
Sbjct: 89  DQVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAISKAELDKVTNRY 148

Query: 162 D-AQSSLSTVQRLLDNTQVRAPFDGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEADVS 220
           D A++ +   +R L+ TQ+ APFDGV+    IE    V     +  + DL+ L +  ++ 
Sbjct: 149 DLAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQVQANQVIMILQDLNDLEVAIEIP 208

Query: 221 ER-HIQHVQLEQA-ARIRFIDGTQTQGKVRYISRLSSPATNTFAIEVEVDNPQQ-AIPAG 277
            R  +  V+  +A A +  I   Q   K+R  S   S  + T+++ +  ++ +   +  G
Sbjct: 209 HRVMLSGVRNTRAIAELSAIPNQQFDLKLRTYSTQPSSDSQTYSVVLGFEDLKGFRVMPG 268

Query: 278 VSAEV 282
           +SA+V
Sbjct: 269 MSAKV 273