Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., putative membrane fusion efflux protein from Pseudomonas putida KT2440

 Score = 67.4 bits (163), Expect = 5e-16
 Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 14/182 (7%)

Query: 85  IGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKA-------QLKVRQQEFN 137
           I  +++G + E+K+   Q V    ++  ID+    A L++A A       QL++R++E  
Sbjct: 46  IAPDVSGWVRELKVHDNQQVKAGDLLMSIDRERFQAALDQASAVTETRAQQLRLREREAA 105

Query: 138 AASALKNKGLQGEV---AFTNAAAA---LTDAQSSLSTVQRLLDNTQVRAPFDGVVETLP 191
             +AL  + +  E+   A  NAA A   L +A++ L   +  L  ++VRAP  G +  L 
Sbjct: 106 RRTALGPEAISAELRENAQINAAIARGELHEAEAQLQVARINLARSEVRAPRSGHITNLR 165

Query: 192 IEKGDFVGIGDPVASIIDLHKLVIEADVSERHIQHVQLEQAARIRFI-DGTQTQGKVRYI 250
           + +G++V  G+ V +++D     I+A   E  +  +++    ++  +  G   QG V  I
Sbjct: 166 LAEGNYVNTGESVMALVDDSTFYIQAYFEETKLPRIRVGDTVKVWLMGTGEPMQGHVESI 225

Query: 251 SR 252
           SR
Sbjct: 226 SR 227