Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., HlyD family secretion protein from Pseudomonas protegens RBAN4

 Score = 75.9 bits (185), Expect = 1e-18
 Identities = 52/182 (28%), Positives = 91/182 (50%), Gaps = 14/182 (7%)

Query: 85  IGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKA-------QLKVRQQEFN 137
           +  +++G + E+K+A  Q V   +++  ID+   +A LE+A+A       QL +R+ E +
Sbjct: 46  VAPDVSGWVRELKVADNQPVKAGELLLSIDRDRFEAALEKAQAVVQTRQQQLSLREHEAS 105

Query: 138 AASALKNKGLQGEV---AFTNAAAA---LTDAQSSLSTVQRLLDNTQVRAPFDGVVETLP 191
             +AL  + +  E+   A  NA  A   L  AQ+     +  L  +QV AP DG +  L 
Sbjct: 106 RRAALGPQAISAELRENAQINAGIARGELRQAQAEAKVAELNLARSQVHAPRDGHITNLR 165

Query: 192 IEKGDFVGIGDPVASIIDLHKLVIEADVSERHIQHVQLEQAARIRFID-GTQTQGKVRYI 250
           + +G++V  G PV ++ID     ++A   E  +  +Q+    ++  +  G   QG V  I
Sbjct: 166 LAEGNYVNAGQPVMALIDDSTFYVQAYFEETKLPRIQVGDPVKVWLMSAGDALQGHVESI 225

Query: 251 SR 252
           SR
Sbjct: 226 SR 227