Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 89.0 bits (219), Expect = 2e-22
 Identities = 66/270 (24%), Positives = 120/270 (44%), Gaps = 8/270 (2%)

Query: 63  SATQTDKVIELYGRTAPDRQAKIGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQL 122
           S T     I   G   P+   ++ +EIAGR+  +   +G  V + Q++  ++  ++ AQL
Sbjct: 52  SPTAYQNKITTTGTVIPNEDVELRSEIAGRVTGINFEEGSRVRQGQLLLTVNDAEMRAQL 111

Query: 123 ERAKAQLKVRQQEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAP 182
           ++ ++  K+ +        L  K    E  +   +  L  A + +  ++  L    VRAP
Sbjct: 112 QKLESNRKLYEDMEKRQRTLLEKEYISEQEYDQVSNQLATATADIQALKASLAKAYVRAP 171

Query: 183 FDGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEADVSERHIQHVQLEQAARIRF-IDGT 241
           FDGV+    + +G +V    P+A ++D+  + I+  +  R+ Q V   +  +I F ++G+
Sbjct: 172 FDGVIGLRQVSEGSYVSATTPIARLVDISPVKIDFAIPGRYSQEV--HEGDQITFTVEGS 229

Query: 242 QT--QGKVRYISRLSSPATNTFAIEVEVDNPQQAIPAGVSAEVELSLMSQAAIKITPAML 299
               Q KV  I     P T T  +    DN  + +  G   +V ++L       + P   
Sbjct: 230 PETYQAKVYAIQPNIDPTTRTLQVRALFDNKNEEVRPGAFVKVSITLKDVDDAILIPTEA 289

Query: 300 ALDEEGNLGVKTLQGEHVKFVPIQLVKAEQ 329
            + E     V  ++G   K VP Q+VK  Q
Sbjct: 290 IIPEATGHKVFLVKGG--KAVP-QMVKIGQ 316