Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., RND family efflux transporter, MFP subunit from Enterobacter asburiae PDN3

 Score = 78.2 bits (191), Expect = 4e-19
 Identities = 96/371 (25%), Positives = 150/371 (40%), Gaps = 56/371 (15%)

Query: 27  IILLALWLGLGDS---NAEEPQTAMEIQVPLAKVGYQTFSATQTDKVIELYGRTAPDRQA 83
           I+L  L +G  +S   NA  P  A+     + K      S +Q D+     GR       
Sbjct: 18  ILLSVLLVGCDNSVAQNAAPPAPAVSAADVVVK------SISQWDR---FNGRIEAVESV 68

Query: 84  KIGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLE-------RAKAQLKVRQQEF 136
           ++   ++G I +V    GQ V K +++  ID     A LE       RAK Q  + Q E 
Sbjct: 69  QLRPRVSGYIDKVNYTDGQEVKKGEVLFTIDDRTYRAALEQAQANLARAKTQASLAQSEA 128

Query: 137 NAASALKNKGL-------QGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAPFDGVVET 189
           N    L N  +       Q   A T A A +  AQ+++   Q  LD T+V AP DG    
Sbjct: 129 NRTDKLVNTNVVSREEWEQRRSAATQAQADIRAAQAAVDAAQLNLDFTKVTAPIDGRASR 188

Query: 190 LPIEKGDFVGIGDP---VASIIDLHKLVIEADVSER---HIQ------------HVQLEQ 231
             I  G+ V  GD    + +++    + +  DV E    H Q            H  L  
Sbjct: 189 ALITSGNLVTAGDTASVLTTLVSQKTVYVYFDVDESTYLHYQNLARSGQGASSNHTALPV 248

Query: 232 AARIRFIDGTQTQGKVRYISRLSSPATNTFAIEVEVDNPQQAIPAGVSAEVELSLMSQAA 291
              +   +G   QGKV ++    +P+T T  +   +DN Q+    G+ A V L     A 
Sbjct: 249 EIGLTGEEGYPHQGKVDFLDNQLTPSTGTIRMRALLDNAQRQFTPGLFARVRLP--GSAE 306

Query: 292 IKITPAMLALDEEGNLGVKTLQGEHVKFVPIQLVKAEQDGVWLTGLGEQVDIITRGQGFV 351
            K T     +D++    V T Q     ++  +  KA++  +    L + + I+ +G   +
Sbjct: 307 FKAT----LIDDK---AVLTDQDRKYVYIVDKEGKAQRRDITPGRLADGLRIVRQG---L 356

Query: 352 RDGDKVLATQL 362
             GDKV+   L
Sbjct: 357 NPGDKVIVEGL 367