Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 380 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score = 82.4 bits (202), Expect = 2e-20
 Identities = 83/349 (23%), Positives = 147/349 (42%), Gaps = 24/349 (6%)

Query: 28  ILLALWLGLGDSNAEEPQTAMEIQVPLAKVGYQTFSATQTDKVIELYGRTAPDRQAKIGA 87
           +LLA  L  G ++A     A     PL  V   T + +   +V+   G   P  +  +G 
Sbjct: 31  LLLAASLLSGCNDAGREAAA----APLRPVRTVTVAPSVAGEVLSQTGEIRPTEETALGF 86

Query: 88  EIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKAQL-------KVRQQEFNAAS 140
            + GR+    +  G +V + ++IA +D  D + QL+ AKA L       ++ +Q      
Sbjct: 87  RLDGRVVSRAVDVGAVVKQGEVIATLDARDSENQLQSAKADLARAAASERLAEQNLKRMK 146

Query: 141 ALKNKGL-------QGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAPFDGVVETLPIE 193
            L   G        + +  +++A +    AQ+S+++ Q  L  T++ AP  GV+  +   
Sbjct: 147 QLAPNGAIARSQLDEAQSNWSSAVSVRESAQASVNSEQDRLGYTRLSAPIAGVITAVSAN 206

Query: 194 KGDFVGIGDPVASIIDLHKLVIEADVSERHIQHVQLEQAARIRFID--GTQTQGKVRYIS 251
            G  V  G  V  +          +VSER I     +    +  +     +TQG VR +S
Sbjct: 207 PGQVVNAGQEVVRLATFAGRDAVFNVSERLIASGLNDPLVTVSLLSNPAIKTQGHVRDVS 266

Query: 252 RLSSPATNTFAIEVEVDNPQQAIPAGVSAEVELSLMSQAAIKITPAMLALDEEGNLGVKT 311
            L+   T T+ + + +  P   +  G + + E++L     I + PA     + G   V  
Sbjct: 267 PLADAQTRTWRVRISLVEPPPEMVLGATVQGEVTLPGGNVINL-PASALTRQGGRPAVFV 325

Query: 312 L--QGEHVKFVPIQLVK-AEQDGVWLTGLGEQVDIITRGQGFVRDGDKV 357
           +  Q + ++  PI L   ++   V   GL     + T G   +R G+KV
Sbjct: 326 VDPQTQTLRLQPITLRHYSDSQMVVADGLAAGDKVATAGVSKLRAGEKV 374