Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 61.6 bits (148), Expect = 3e-14
 Identities = 50/227 (22%), Positives = 106/227 (46%), Gaps = 22/227 (9%)

Query: 81  RQAKIGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKAQL-------KVRQ 133
           +  ++ + + G + E+ I +G+ V K Q++   +  +  A L +A A L       K  +
Sbjct: 65  QNVELRSRVPGFLEEILIDEGKYVKKGQLLFKTNDEEYKAALAKASANLTSAIAEAKALE 124

Query: 134 QEFNAASALKNKGLQGE------VAFTNAAAA-LTDAQSSLSTVQRLLDNTQVRAPFDGV 186
            E +    + NK +  E      +A  NA  A + +A+S+ +     L  T+++APF G+
Sbjct: 125 YEVDRLRIMVNKNVISESELKVALAKHNAVLAKIEEAKSAYAHADTQLGYTEIKAPFSGI 184

Query: 187 VETLPIEKGDFVGIGDPVASIIDLHKLVIEADVSER-HIQHVQLEQ-----AARIRFIDG 240
           ++ +P   G  +  G  +  + D+  + +  +VSER ++++V  ++       ++   DG
Sbjct: 185 IDRIPHRIGSLLDQGSLLTKVSDISAVHVYFNVSEREYLEYVNTQEDSNNDIVKLILADG 244

Query: 241 T--QTQGKVRYISRLSSPATNTFAIEVEVDNPQQAIPAGVSAEVELS 285
           T    +GK+  +    +  T + A      N +Q +  G + +V L+
Sbjct: 245 TPYPYEGKIETMEGEFNANTGSIAFRARFPNQKQILKHGATGKVVLT 291